From ed687455bc53cc9720f82bf228c0f68c6bff3624 Mon Sep 17 00:00:00 2001
From: Vincent Vanoosthuyse <vincent.vanoosthuyse@ens-lyon.fr>
Date: Mon, 23 Jul 2018 14:53:35 +0200
Subject: [PATCH] fix 4 at the beginning of process in .nf file

---
 src/RNAseq_sen1D.nf | 4 ++--
 1 file changed, 2 insertions(+), 2 deletions(-)

diff --git a/src/RNAseq_sen1D.nf b/src/RNAseq_sen1D.nf
index 9906dd1..f9353bd 100644
--- a/src/RNAseq_sen1D.nf
+++ b/src/RNAseq_sen1D.nf
@@ -10,7 +10,7 @@
 * for paired-end data
 */
 
-params.fastq = "$baseDir/data/fastq/*_R{1,2}_001.fastq.gz"
+params.fastq = "$baseDir/data/fastq/*_R{1,2}.fastq.gz"
 
 log.info "fastq files : ${params.fastq}"
 
@@ -40,7 +40,7 @@ process adaptor_removal {
   """
 }
 
-process 4_random_bases_trimming {
+process random_bases_4_trimming {
   tag "$pair_id"
   publishDir "results/fastq/adaptor_removal/", mode: 'copy'
 
-- 
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