diff --git a/src/RNAseq_sen1D.nf b/src/RNAseq_sen1D.nf index 9906dd1ed38e37fcdbb106adbe692a44fd4af97a..f9353bd0104d5668cfb434d5c7d228be058eaa77 100644 --- a/src/RNAseq_sen1D.nf +++ b/src/RNAseq_sen1D.nf @@ -10,7 +10,7 @@ * for paired-end data */ -params.fastq = "$baseDir/data/fastq/*_R{1,2}_001.fastq.gz" +params.fastq = "$baseDir/data/fastq/*_R{1,2}.fastq.gz" log.info "fastq files : ${params.fastq}" @@ -40,7 +40,7 @@ process adaptor_removal { """ } -process 4_random_bases_trimming { +process random_bases_4_trimming { tag "$pair_id" publishDir "results/fastq/adaptor_removal/", mode: 'copy'