From bf9c81d8fe58c1787b0781378e7db2d3bd509d5a Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Wed, 30 May 2018 16:33:37 +0200
Subject: [PATCH] HTSeq/0.8.0: add docker files
---
src/nf_modules/HTSeq/0.8.0/Dockerfile | 17 +++++++++++++++++
src/nf_modules/HTSeq/0.8.0/docker_init.sh | 2 ++
2 files changed, 19 insertions(+)
create mode 100644 src/nf_modules/HTSeq/0.8.0/Dockerfile
create mode 100755 src/nf_modules/HTSeq/0.8.0/docker_init.sh
diff --git a/src/nf_modules/HTSeq/0.8.0/Dockerfile b/src/nf_modules/HTSeq/0.8.0/Dockerfile
new file mode 100644
index 0000000..c655738
--- /dev/null
+++ b/src/nf_modules/HTSeq/0.8.0/Dockerfile
@@ -0,0 +1,17 @@
+
+FROM ubuntu:18.04
+MAINTAINER Laurent Modolo
+
+ENV HTSEQ_VERSION=0.8.0
+ENV PACKAGES build-essential=12.4* \
+ python3-pip=9.0.1* \
+ python3-setuptools=39.0.1* \
+ python3-dev=3.6.5* \
+ python3-wheel=0.30.0*
+
+RUN apt-get update && \
+ apt-get install -y --no-install-recommends ${PACKAGES} && \
+ apt-get clean
+
+RUN pip3 install numpy==1.14.3
+RUN pip3 install HTSeq==${HTSEQ_VERSION}
diff --git a/src/nf_modules/HTSeq/0.8.0/docker_init.sh b/src/nf_modules/HTSeq/0.8.0/docker_init.sh
new file mode 100755
index 0000000..1c135c6
--- /dev/null
+++ b/src/nf_modules/HTSeq/0.8.0/docker_init.sh
@@ -0,0 +1,2 @@
+#!/bin/sh
+docker build src/nf_modules/HTSeq/0.8.0 -t 'htseq:0.8.0'
--
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