diff --git a/src/RNAseq_sen1D.config b/src/RNAseq_sen1D.config
index 8d9967f3a551c8ba0411b158acf0e808c840a6f5..556c57c3ed1a3b8c366c0627440ab76c371470e7 100644
--- a/src/RNAseq_sen1D.config
+++ b/src/RNAseq_sen1D.config
@@ -28,10 +28,10 @@ profiles {
         container = "urqt:d62c1f8"
       }
       $index_fasta {
-        container = "bowtie2:2.3.4.1"
+        container = "bowtie:1.2.2"
       }
       $mapping_fastq {
-        container = "bowtie2:2.3.4.1"
+        container = "bowtie:1.2.2"
       }
       $sort_bam_forward {
         container = "samtools:1.7"
@@ -136,10 +136,10 @@ profiles {
         penv = 'openmp8'
       }
       $index_fasta {
-        beforeScript = "module purge; module load Bowtie2/2.3.4.1"
+        beforeScript = "module purge; module load Bowtie/1.2.2"
       }
       $mapping_fastq {
-        beforeScript = "module purge; module load SAMtools/1.7; module load Bowtie2/2.3.4.1"
+        beforeScript = "module purge; module load SAMtools/1.7; module load Bowtie/1.2.2"
       }
       $sort_bam_forward {
         beforeScript = "module purge; module load SAMtools/1.7"