From 5941bae113260559fefbd5fb74351a5f09cfa57c Mon Sep 17 00:00:00 2001
From: vvanoost <vincent.vanoosthuyse@ens-lyon.fr>
Date: Tue, 24 Jul 2018 13:45:12 +0200
Subject: [PATCH] change SAM tools
---
src/RNAseq_sen1D.nf | 2 +-
1 file changed, 1 insertion(+), 1 deletion(-)
diff --git a/src/RNAseq_sen1D.nf b/src/RNAseq_sen1D.nf
index e2eaf77..361028c 100644
--- a/src/RNAseq_sen1D.nf
+++ b/src/RNAseq_sen1D.nf
@@ -158,7 +158,7 @@ fi
/* bams sorting */
process sort_bam {
- tag "$bam.baseName"
+ tag "${pair_id}.bam"
cpus 4
input:
--
GitLab