From 53680ef9adcfa78a674becf4c19bdf66d7c8a9b6 Mon Sep 17 00:00:00 2001 From: Laurent Modolo <laurent.modolo@ens-lyon.fr> Date: Tue, 19 Jun 2018 17:27:58 +0200 Subject: [PATCH] TP_computational_biologists.md: add merge instruction --- doc/TP_computational_biologists.md | 8 ++++++++ 1 file changed, 8 insertions(+) diff --git a/doc/TP_computational_biologists.md b/doc/TP_computational_biologists.md index 212eaff..881c25c 100644 --- a/doc/TP_computational_biologists.md +++ b/doc/TP_computational_biologists.md @@ -174,4 +174,12 @@ The [`kallisto.nf`](./src/nf_modules/Kallisto/kallisto.nf) file contains example - Input and output must be clearly defined. - Your process usable as a starting process or a process retrieving the output of another process. +For more informations on processes and channels you can check the [nextflow documentation](https://www.nextflow.io/docs/latest/index.html). + +## Making your wrapper available to the LBMC + +To make your module available to the LBMC you must have a `tests.sh` script and one or many `docker_init.sh` scripts working without errors . + +Then after pushing your modification on your forked repository, you can make a Merge Request to the [PSMN/modules](https://gitlab.biologie.ens-lyon.fr/pipelines/nextflow) **dev** branch. Where it will be tested and +integrated to the **master** branch. -- GitLab