From 18c29d70cb8ba410f05cad5254d0c50fb6cfc7cc Mon Sep 17 00:00:00 2001
From: vvanoost <vincent.vanoosthuyse@ens-lyon.fr>
Date: Mon, 30 Jul 2018 14:36:21 +0200
Subject: [PATCH] correct MultiQC
---
src/RNAseq_sen1D.nf | 6 ++++--
1 file changed, 4 insertions(+), 2 deletions(-)
diff --git a/src/RNAseq_sen1D.nf b/src/RNAseq_sen1D.nf
index ea6b4c9..82493ed 100644
--- a/src/RNAseq_sen1D.nf
+++ b/src/RNAseq_sen1D.nf
@@ -236,13 +236,15 @@ fi
/* MultiQC */
process multiqc {
- tag "$repport.baseName"
+ tag "$repport"
publishDir "results/fastq/multiqc/", mode: 'copy'
cpus = 1
input:
file repport from fastqc_repport.collect()
-
+ file repport_urqt from urqt_fastqc_repport.collect()
+ file repport_cutadapt from cutadapt_fastqc_repport.collect()
+ file repport_randombp from randombp_fastqc_repport.collect()
output:
file "*multiqc_*" into multiqc_report
--
GitLab