diff --git a/README.md b/README.md index 36d3a555e74b846b1687f51f1f7f7d678218906c..06d8df25230ac6853bd486df6f76e8b5c0de6a15 100644 --- a/README.md +++ b/README.md @@ -3,8 +3,6 @@ This function aims to find the optimum resolution parameter for clustering single-cell RNA-Seq data analyzed with _scanpy_, by calculating the BIC score or the Calinski-Harabasz score of each clustering. -It has been inspired by this [read](https://towardsdatascience.com/are-you-still-using-the-elbow-method-5d271b3063bd) and then adapted to the single-cell analysis in scanpy. - Here, the minimum of the BIC or Calinski-Harabasz score indicates the optimum resolution parameter. ### BIC score