diff --git a/README.md b/README.md index b02a05f644126830b1576ec71c0bc09f46e74511..0dd02cc3524eb24e413354911fb3e134f21a9dd9 100644 --- a/README.md +++ b/README.md @@ -35,19 +35,19 @@ To install nextflow on you computer simply run the following command: src/install_nextflow.sh ``` -Then to initialise a given tools run the following command: +Then to initialize a given tools run the following command: ```sh src/docker_modules/<tool_name>/<tool_version>/docker_init.sh ``` -for example to initialise `file_handle` version `0.1.1`, run: +For example to initialize `file_handle` version `0.1.1`, run: ```sh src/docker_modules/file_handle/0.1.1/docker_init.sh ``` -To initialise all the tools: +To initialize all the tools: ```sh find src/docker_modules/ -name "docker_init.sh" | awk '{system($0)}' ``` @@ -70,7 +70,7 @@ Then to run the tests for a given tools run the following command: src/nf_modules/<tool_name>/<tool_version>/tests/tests.sh ``` -for example to run the tests on `Bowtie2` run: +For example to run the tests on `Bowtie2` run: ```sh src/nf_modules/Bowtie2/tests/tests.sh