From 9329a13d91f8f4ac0026880ad26fa49f245fc185 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 4 Mar 2019 11:46:09 +0100
Subject: [PATCH] bcftools: add singularity files
---
.../bcftools/1.7/bcftools.def | 19 +++++++++++++++++++
src/singularity_modules/bcftools/1.7/build.sh | 3 +++
2 files changed, 22 insertions(+)
create mode 100644 src/singularity_modules/bcftools/1.7/bcftools.def
create mode 100755 src/singularity_modules/bcftools/1.7/build.sh
diff --git a/src/singularity_modules/bcftools/1.7/bcftools.def b/src/singularity_modules/bcftools/1.7/bcftools.def
new file mode 100644
index 0000000..1d35356
--- /dev/null
+++ b/src/singularity_modules/bcftools/1.7/bcftools.def
@@ -0,0 +1,19 @@
+Bootstrap: docker
+From: ubuntu:18.04
+
+%labels
+MAINTAINER Laurent Modolo
+
+%post
+BCFTOOLS_VERSION=1.7
+PACKAGES=bcftools=${BCFTOOLS_VERSION}*
+
+apt-get update && \
+apt-get install -y --no-install-recommends ${PACKAGES} && \
+apt-get clean
+
+%environment
+export BCFTOOLS_VERSION=1.7
+
+%runscript
+exec /bin/bash "$@"
diff --git a/src/singularity_modules/bcftools/1.7/build.sh b/src/singularity_modules/bcftools/1.7/build.sh
new file mode 100755
index 0000000..14ff850
--- /dev/null
+++ b/src/singularity_modules/bcftools/1.7/build.sh
@@ -0,0 +1,3 @@
+#/bin/sh
+sudo singularity build --force bin/bcftools:1.7.sif src/singularity_modules/bcftools/1.7/bcftools.def
+singularity sign bin/bcftools:1.7.sif
--
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