From 8891d2277bad2e41a50f2212a36a61ec1c25cf29 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent@modolo.fr>
Date: Mon, 8 Oct 2018 16:42:33 +0200
Subject: [PATCH] SNP_calling.nf: fix missing report for samtools SNP
---
src/SNP_calling.nf | 2 --
1 file changed, 2 deletions(-)
diff --git a/src/SNP_calling.nf b/src/SNP_calling.nf
index b9ffa51..0de5eb4 100644
--- a/src/SNP_calling.nf
+++ b/src/SNP_calling.nf
@@ -352,7 +352,6 @@ process samtools_SNP_tumor {
output:
set file_id_tumor, "*.vcf" into vcf_files_tumor
- file "*_samtools_SNP_report.txt" into samptools_SNP_report_tumor
script:
"""
@@ -377,7 +376,6 @@ process samtools_SNP_norm {
output:
set file_id_norm, "*.vcf" into vcf_files_norm
- file "*_samtools_SNP_report.txt" into samtools_SNP_report_norm
script:
"""
--
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