diff --git a/src/nf_modules/Kallisto/0.43.1/Dockerfile b/src/nf_modules/Kallisto/0.43.1/Dockerfile new file mode 100644 index 0000000000000000000000000000000000000000..68a731a7fad98ed9c423909797d259baf2ea66eb --- /dev/null +++ b/src/nf_modules/Kallisto/0.43.1/Dockerfile @@ -0,0 +1,15 @@ +FROM ubuntu:18.04 +MAINTAINER Laurent Modolo + +ENV KALLISTO_VERSION=0.43.1 +ENV PACKAGES curl=7.58.0* \ + ca-certificates=20180409 + +RUN apt-get update && \ + apt-get install -y --no-install-recommends ${PACKAGES} && \ + apt-get clean + +RUN curl -k -L https://github.com/pachterlab/kallisto/releases/download/v${KALLISTO_VERSION}/kallisto_linux-v${KALLISTO_VERSION}.tar.gz -o kallisto_linux-v${KALLISTO_VERSION}.tar.gz && \ +tar xzf kallisto_linux-v${KALLISTO_VERSION}.tar.gz && \ +cp kallisto_linux-v${KALLISTO_VERSION}/kallisto /usr/bin && \ +rm -Rf kallisto_linux-v${KALLISTO_VERSION}* diff --git a/src/nf_modules/Kallisto/0.43.1/docker_init.sh b/src/nf_modules/Kallisto/0.43.1/docker_init.sh new file mode 100755 index 0000000000000000000000000000000000000000..af8c765814fa5e2ddecdd95940c18c1e728f8f21 --- /dev/null +++ b/src/nf_modules/Kallisto/0.43.1/docker_init.sh @@ -0,0 +1,2 @@ +#!/bin/sh +docker build src/nf_modules/Kallisto/0.43.1 -t 'kallisto:0.43.1'