diff --git a/src/docker_modules/ucsc/375/Dockerfile b/src/docker_modules/ucsc/375/Dockerfile index 0e30931cb6223c0c189e933fd4dbccc508c8d8cc..7d0b2f004eb6cc391bef55a1e93a702a2e685daa 100644 --- a/src/docker_modules/ucsc/375/Dockerfile +++ b/src/docker_modules/ucsc/375/Dockerfile @@ -1,12 +1,16 @@ -FROM alpine:3.8 +FROM debian:jessie MAINTAINER Laurent Modolo -ENV UCSC_VERSION=375 -ENV PACKAGES rsync \ - bash +ENV PACKAGES apt-utils \ + curl \ + build-essential -RUN apk update && \ - apk add ${PACKAGES} +RUN apt-get update && \ + apt-get install -y ${PACKAGES} -RUN rsync -aP rsync://hgdownload.soe.ucsc.edu/genome/admin/exe/linux.x86_64/ /usr/bin/ +ENV UCSC_VERSION=375 +RUN curl -k -L http://hgdownload.soe.ucsc.edu/admin/exe/userApps.v${UCSC_VERSION}.src.tgz -o userApps.v${UCSC_VERSION}.src.tgz &&\ +tar xvf userApps.v${UCSC_VERSION}.src.tgz &&\ +cd userApps/ && \ +make