From 6a5409199485820c3ac356d5b7388f76c82cd880 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent@modolo.fr>
Date: Mon, 17 Sep 2018 12:07:44 +0200
Subject: [PATCH] sambamba: add Docker files
---
src/docker_modules/sambamba/0.6.7/Dockerfile | 17 +++++++++++++++++
.../sambamba/0.6.7/docker_init.sh | 2 ++
2 files changed, 19 insertions(+)
create mode 100644 src/docker_modules/sambamba/0.6.7/Dockerfile
create mode 100755 src/docker_modules/sambamba/0.6.7/docker_init.sh
diff --git a/src/docker_modules/sambamba/0.6.7/Dockerfile b/src/docker_modules/sambamba/0.6.7/Dockerfile
new file mode 100644
index 0000000..5858a17
--- /dev/null
+++ b/src/docker_modules/sambamba/0.6.7/Dockerfile
@@ -0,0 +1,17 @@
+FROM ubuntu:18.04
+MAINTAINER Laurent Modolo
+
+ENV SAMBAMBA_VERSION=0.6.7
+ENV PACKAGES curl=7.58.0* \
+ ca-certificates=20180409 \
+ build-essential=12.4* \
+ zlib1g-dev=1:1.2.11*
+
+RUN apt-get update && \
+ apt-get install -y --no-install-recommends ${PACKAGES} && \
+ apt-get clean
+
+RUN curl -k -L https://github.com/biod/sambamba/releases/download/v${SAMBAMBA_VERSION}/sambamba_v${SAMBAMBA_VERSION}_linux.tar.bz2 -o sambamba_v${SAMBAMBA_VERSION}_linux.tar.bz2 && \
+tar xvjf sambamba_v${SAMBAMBA_VERSION}_linux.tar.bz2 && \
+mv sambamba /usr/bin/ && \
+rm -R sambamba_v${SAMBAMBA_VERSION}_linux*
diff --git a/src/docker_modules/sambamba/0.6.7/docker_init.sh b/src/docker_modules/sambamba/0.6.7/docker_init.sh
new file mode 100755
index 0000000..2db68c5
--- /dev/null
+++ b/src/docker_modules/sambamba/0.6.7/docker_init.sh
@@ -0,0 +1,2 @@
+#!/bin/sh
+docker build src/docker_modules/sambamba/0.6.7 -t 'sambamba:0.6.7'
--
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