diff --git a/src/nf_modules/MUSIC/peak_calling_paired.config b/src/nf_modules/MUSIC/peak_calling_paired.config new file mode 100644 index 0000000000000000000000000000000000000000..4685752be3d8e66da4e76aeffc82ce58d50389b3 --- /dev/null +++ b/src/nf_modules/MUSIC/peak_calling_paired.config @@ -0,0 +1,30 @@ +profiles { + docker { + docker.temp = 'auto' + docker.enabled = true + process { + $compute_mappability { + container = "music:6613c53" + } + $music_preprocessing { + container = "music:6613c53" + } + $music_computation { + container = "music:6613c53" + } + } + } + sge { + process{ + $compute_mappability { + beforeScript = "module purge; module load MUSIC/6613c53" + } + $music_preprocessing { + beforeScript = "module purge; module load MUSIC/6613c53" + } + $music_computation { + beforeScript = "module purge; module load MUSIC/6613c53" + } + } + } +} diff --git a/src/nf_modules/MUSIC/peak_calling_single.config b/src/nf_modules/MUSIC/peak_calling_single.config index 7c53891779e89d48608079a71bd20405d75f6a9e..4685752be3d8e66da4e76aeffc82ce58d50389b3 100644 --- a/src/nf_modules/MUSIC/peak_calling_single.config +++ b/src/nf_modules/MUSIC/peak_calling_single.config @@ -9,12 +9,6 @@ profiles { $music_preprocessing { container = "music:6613c53" } - $music_sort { - container = "music:6613c53" - } - $music_dedup { - container = "music:6613c53" - } $music_computation { container = "music:6613c53" } @@ -28,12 +22,6 @@ profiles { $music_preprocessing { beforeScript = "module purge; module load MUSIC/6613c53" } - $music_sort { - beforeScript = "module purge; module load MUSIC/6613c53" - } - $music_dedup { - beforeScript = "module purge; module load MUSIC/6613c53" - } $music_computation { beforeScript = "module purge; module load MUSIC/6613c53" }