diff --git a/src/singularity_modules/kallisto/0.43.1/build.sh b/src/singularity_modules/kallisto/0.43.1/build.sh
new file mode 100755
index 0000000000000000000000000000000000000000..76186317b4ad14210fc9c06e627840532de79e3a
--- /dev/null
+++ b/src/singularity_modules/kallisto/0.43.1/build.sh
@@ -0,0 +1,3 @@
+#/bin/sh
+sudo singularity build --force bin/kallisto:0.43.1.sif src/singularity_modules/kallisto/0.43.1/kallisto.def
+singularity sign bin/kallisto:0.43.1.sif
diff --git a/src/singularity_modules/kallisto/0.43.1/kallisto.def b/src/singularity_modules/kallisto/0.43.1/kallisto.def
new file mode 100644
index 0000000000000000000000000000000000000000..3b9899a03311a1bce2a8b6c1e8f83e861db773c1
--- /dev/null
+++ b/src/singularity_modules/kallisto/0.43.1/kallisto.def
@@ -0,0 +1,25 @@
+Bootstrap: docker
+From: ubuntu:18.04
+
+%labels
+MAINTAINER Laurent Modolo
+
+%post
+KALLISTO_VERSION=0.43.1
+PACKAGES="curl \
+ca-certificates"
+
+apt-get update && \
+apt-get install -y --no-install-recommends ${PACKAGES} && \
+apt-get clean
+
+curl -k -L  https://github.com/pachterlab/kallisto/releases/download/v${KALLISTO_VERSION}/kallisto_linux-v${KALLISTO_VERSION}.tar.gz -o kallisto_linux-v${KALLISTO_VERSION}.tar.gz && \
+tar xzf kallisto_linux-v${KALLISTO_VERSION}.tar.gz && \
+cp kallisto_linux-v${KALLISTO_VERSION}/kallisto /usr/bin && \
+rm -Rf kallisto_linux-v${KALLISTO_VERSION}*
+
+%environment
+export KALLISTO_VERSION=0.44.0
+
+%runscript
+exec /bin/bash "$@"
diff --git a/src/singularity_modules/kallisto/0.44.0/build.sh b/src/singularity_modules/kallisto/0.44.0/build.sh
new file mode 100755
index 0000000000000000000000000000000000000000..537303d5c355f5076db3247b81ef683effbb95f5
--- /dev/null
+++ b/src/singularity_modules/kallisto/0.44.0/build.sh
@@ -0,0 +1,3 @@
+#/bin/sh
+sudo singularity build --force bin/kallisto:0.44.0.sif src/singularity_modules/kallisto/0.44.0/kallisto.def
+singularity sign bin/kallisto:0.44.0.sif
diff --git a/src/singularity_modules/kallisto/0.44.0/kallisto.def b/src/singularity_modules/kallisto/0.44.0/kallisto.def
new file mode 100644
index 0000000000000000000000000000000000000000..613218ac11e326beac41405800ae317c2565482c
--- /dev/null
+++ b/src/singularity_modules/kallisto/0.44.0/kallisto.def
@@ -0,0 +1,25 @@
+Bootstrap: docker
+From: ubuntu:18.04
+
+%labels
+MAINTAINER Laurent Modolo
+
+%post
+KALLISTO_VERSION=0.44.0
+PACKAGES="curl \
+ca-certificates"
+
+apt-get update && \
+apt-get install -y --no-install-recommends ${PACKAGES} && \
+apt-get clean
+
+curl -k -L  https://github.com/pachterlab/kallisto/releases/download/v${KALLISTO_VERSION}/kallisto_linux-v${KALLISTO_VERSION}.tar.gz -o kallisto_linux-v${KALLISTO_VERSION}.tar.gz && \
+tar xzf kallisto_linux-v${KALLISTO_VERSION}.tar.gz && \
+cp kallisto_linux-v${KALLISTO_VERSION}/kallisto /usr/bin && \
+rm -Rf kallisto_linux-v${KALLISTO_VERSION}*
+
+%environment
+export KALLISTO_VERSION=0.44.0
+
+%runscript
+exec /bin/bash "$@"