From 018f08c7fe92aa6d650c75e35eab650f8c80c0f3 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 4 Jun 2018 16:55:04 +0200
Subject: [PATCH] Bowtie2: config fix module name
---
src/nf_modules/Bowtie2/bowtie2.config | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/nf_modules/Bowtie2/bowtie2.config b/src/nf_modules/Bowtie2/bowtie2.config
index 18ffbc6..e34b42f 100644
--- a/src/nf_modules/Bowtie2/bowtie2.config
+++ b/src/nf_modules/Bowtie2/bowtie2.config
@@ -14,10 +14,10 @@ profiles {
sge {
process{
$index_fasta {
- beforeScript = "module purge; module load Bowite2/2.3.4.1"
+ beforeScript = "module purge; module load Bowtie2/2.3.4.1"
}
$mapping_fastq {
- beforeScript = "module purge; module load SAMtools/1.7; module load Bowite2/2.3.4.1"
+ beforeScript = "module purge; module load SAMtools/1.7; module load Bowtie2/2.3.4.1"
}
}
}
--
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