diff --git a/README.md b/README.md new file mode 100644 index 0000000000000000000000000000000000000000..c3097afb9fb29ccde746579b08dd465ef08aa818 --- /dev/null +++ b/README.md @@ -0,0 +1,26 @@ +# Nuclei signal quantification + +## Installation + +### Create a new `conda` environment + +* Using the `environment.yml` file, create a new environment with all the necessary dependencies: + +```bash +cd nuclei_quantification +conda env create -f environment.yml +``` + +## Usage + +* Activate the environment: + +```bash +conda activate nuclei-quantification +``` + +* Launch the Notebook server + +```bash +jupyter notebook +```