Commits · 5a252dbe2f59a836985ec24faacf00dab738a3e8 · nlecouvr / nextflow

19 Jan, 2022 10 commits
- adding kalisto · 5a252dbe
  nlecouvr authored Jan 19, 2022
  
  5a252dbe
- correction · ec7128a5
  nlecouvr authored Jan 19, 2022
  
  ec7128a5
- correction · b3928229
  nlecouvr authored Jan 19, 2022
  
  b3928229
- addition of fasta_from_bed · adc63251
  nlecouvr authored Jan 19, 2022
  
  adc63251
- addition of fastq parameter · 9e1bd683
  nlecouvr authored Jan 19, 2022
  
  9e1bd683
- trying to fix again · 525091b2
  nlecouvr authored Jan 19, 2022
  
  525091b2
- correction of the corrections · 74cc5d3d
  nlecouvr authored Jan 19, 2022
  
  74cc5d3d
- bug fix · 9eea6ded
  nlecouvr authored Jan 19, 2022
  
  9eea6ded
- test2 · 8ec1ef87
  nlecouvr authored Jan 19, 2022
  
  8ec1ef87
- test · 8364da22
  nlecouvr authored Jan 19, 2022
  
  8364da22
18 Jan, 2022 9 commits
- Update RNASeq.nf · 1dfdb6f9
  nlecouvr authored Jan 18, 2022
  
  1dfdb6f9
- Add new file · d8c0caeb
  nlecouvr authored Jan 18, 2022
  
  d8c0caeb
- Update fasta_sampler.nf · e12afa7d
  nlecouvr authored Jan 18, 2022
  
  e12afa7d
- Update fasta_sampler.nf · fdbf33f8
  nlecouvr authored Jan 18, 2022
  
  fdbf33f8
- Update fasta_sampler.nf · c6d18387
  nlecouvr authored Jan 18, 2022
  
  c6d18387
- Update fasta_sampler.nf · 6ce3ecde
  nlecouvr authored Jan 18, 2022
  
  6ce3ecde
- Merge branch 'nlecouvr-master-patch-67481' into 'master' · 657dad1b
  nlecouvr authored Jan 18, 2022
```
Nlecouvr master patch 67481

See merge request !1
```
  657dad1b
- Update src/fasta_sampler.nf · e53c7a3f
  nlecouvr authored Jan 18, 2022
  
  e53c7a3f
- Update src/fasta_sampler.nf · fee2c9dd
  nlecouvr authored Jan 18, 2022
  
  fee2c9dd
06 Jan, 2022 3 commits
- hisat2: add main.nf · b6110260
  Laurent Modolo authored Jan 06, 2022
  
  b6110260
- Docker: add histat2 2.2.1 · 1011a2a3
  Laurent Modolo authored Jan 06, 2022
  
  1011a2a3
- Docker: add samtools 1.14 · 5090e8a5
  Laurent Modolo authored Jan 06, 2022
  
  5090e8a5
30 Nov, 2021 1 commit
- Close merge request if [[ -z ]]; then ; echo test; fi · 7daa2241
  Laurent Modolo authored Nov 30, 2021
  
  7daa2241
02 Nov, 2021 9 commits
- multiqc: remove view · 49eb0ea8
  Laurent Modolo authored Nov 02, 2021
  
  49eb0ea8
- multiqc: better handling of List as input · aaec95a6
  Laurent Modolo authored Nov 02, 2021
  
  aaec95a6
- samtools: add compatbility with mutlqc · b87a994a
  Laurent Modolo authored Nov 02, 2021
  
  b87a994a
- samtools and picardtools: add compatibility with mutliqc · e9175cbd
  Laurent Modolo authored Nov 02, 2021
  
  e9175cbd
- samtools: rename flagstat log for multiqc · a7358e47
  Laurent Modolo authored Nov 02, 2021
  
  a7358e47
- mutliqc: Dockerfile switch from debian to python img · 6a448ad6
  Laurent Modolo authored Nov 02, 2021
  
  6a448ad6
- multiqc: update 1.9 -> 1.11 · bc023a73
  Laurent Modolo authored Nov 02, 2021
  
  bc023a73
- multiqc: remove view · fd6c4ae7
  Laurent Modolo authored Nov 02, 2021
  
  fd6c4ae7
- mutliqc.nf: fix flatten procedure · a92d2e02
  Laurent Modolo authored Nov 02, 2021
  
  a92d2e02
26 Oct, 2021 8 commits
- danpos: fix typo :164 · f8dba601
  Laurent Modolo authored Oct 26, 2021
  
  f8dba601
- danpos: fix typo :153 · ffc99bdc
  Laurent Modolo authored Oct 26, 2021
  
  ffc99bdc
- danpos: include bigwig_to_wig :6 · 0acd330e
  Laurent Modolo authored Oct 26, 2021
  
  0acd330e
- danpos: rename dpos_bw_no_b :153 · 0021af6c
  Laurent Modolo authored Oct 26, 2021
  
  0021af6c
- danpos: add dpos_bw_no_b process · f1a4012f
  Laurent Modolo authored Oct 26, 2021
  
  f1a4012f
- danpos: add -b to dpos_wig · f8760e45
  Laurent Modolo authored Oct 26, 2021
  
  f8760e45
- danspo: fix dpos_bw wig output · c87853f5
  Laurent Modolo authored Oct 26, 2021
  
  c87853f5
- danspo: fix dpos_wig output · 9351da4f
  Laurent Modolo authored Oct 26, 2021
  
  9351da4f