diff --git a/src/Dam_ID_analysis.nf b/src/Dam_ID_analysis.nf index 7fdaf158776bbc58f125ea817750dccebc276b07..947330bd829578032ffa2527c63d64df5ef6112a 100644 --- a/src/Dam_ID_analysis.nf +++ b/src/Dam_ID_analysis.nf @@ -20,6 +20,7 @@ log.info "reads files : ${params.reads}" log.info "genome file : ${params.genome}" + /* channel .fromPath( params.bed ) @@ -38,7 +39,7 @@ channel workflow { fastp(reads) //mapping - index_fasta(genome) + index_fasta(params.genome) mapping_fastq(index_fasta.out.index.collect(), reads) }