diff --git a/src/RNASeq.nf b/src/RNASeq.nf new file mode 100644 index 0000000000000000000000000000000000000000..9cc10adb2d436bb24d4a9daa88cfb6ca6af900d3 --- /dev/null +++ b/src/RNASeq.nf @@ -0,0 +1,11 @@ +nextflow.enable.dsl=2 + +include { fastp } from "./nf_modules/fastp/main.nf" + +channel + .fromFilePairs( "data/tiny_dataset/fastq/*_R{1,2}.fastq", size: -1) + .set { fastq_files } + +workflow { + fastp(fastp_files) +}