From 8364da22bf027eda9b49364ebcbbf12dccf3e41d Mon Sep 17 00:00:00 2001
From: Nathan Lecouvreur <nathan.lecouvreur@ens-lyon.fr>
Date: Wed, 19 Jan 2022 09:36:37 +0100
Subject: [PATCH] test
---
src/RNASeq.nf | 3 +++
1 file changed, 3 insertions(+)
diff --git a/src/RNASeq.nf b/src/RNASeq.nf
index ce28687..6a0b55f 100644
--- a/src/RNASeq.nf
+++ b/src/RNASeq.nf
@@ -1,11 +1,14 @@
nextflow.enable.dsl=2
+
include { fastp } from "./nf_modules/fastp/main.nf"
+
channel
.fromFilePairs( "data/tiny_dataset/fastq/*_R{1,2}.fastq", size: -1)
.set { fastq_files }
+
workflow {
fastp(fastq_files)
}
--
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