diff --git a/src/RNASeq.nf b/src/RNASeq.nf index ce28687f78d0248bd1cf6fd5e812db43bedd86a8..6a0b55f91fb1c27e836cbd5e5b904d434974bef3 100644 --- a/src/RNASeq.nf +++ b/src/RNASeq.nf @@ -1,11 +1,14 @@ nextflow.enable.dsl=2 + include { fastp } from "./nf_modules/fastp/main.nf" + channel .fromFilePairs( "data/tiny_dataset/fastq/*_R{1,2}.fastq", size: -1) .set { fastq_files } + workflow { fastp(fastq_files) }