diff --git a/src/nf_modules/samblaster/dedup_sams.config b/src/nf_modules/samblaster/dedup_sams.config index 646ecb8ea30e023d99053858ddb0b0ff451b1fd9..06abf41e787f32a8a75e0aeee7d599637f3aafd4 100644 --- a/src/nf_modules/samblaster/dedup_sams.config +++ b/src/nf_modules/samblaster/dedup_sams.config @@ -11,7 +11,14 @@ profiles { psmn { process{ withname: dedup_sam { - beforeScript = "module purge; module load samblaster/0.1.24" + beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules" + module = "samblaster/0.1.24" + executor = "sge" + cpus = 16 + memory = "30GB" + time = "24h" + queue = 'E5-2670deb128A,E5-2670deb128B,E5-2670deb128C,E5-2670deb128D,E5-2670deb128E,E5-2670deb128F' + penv = 'openmp16' } } }