From eb3714802c22d3109c569edf47b2faebf0132724 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Thu, 26 Jul 2018 15:22:27 +0200
Subject: [PATCH] Bowtie:1.2.2: add docker files
---
src/docker_modules/Bowtie/1.2.2/Dockerfile | 12 ++++++++++++
src/docker_modules/Bowtie/1.2.2/docker_init.sh | 2 ++
2 files changed, 14 insertions(+)
create mode 100644 src/docker_modules/Bowtie/1.2.2/Dockerfile
create mode 100755 src/docker_modules/Bowtie/1.2.2/docker_init.sh
diff --git a/src/docker_modules/Bowtie/1.2.2/Dockerfile b/src/docker_modules/Bowtie/1.2.2/Dockerfile
new file mode 100644
index 0000000..128e68a
--- /dev/null
+++ b/src/docker_modules/Bowtie/1.2.2/Dockerfile
@@ -0,0 +1,12 @@
+FROM ubuntu:18.04
+MAINTAINER Laurent Modolo
+
+ENV BOWTIE_VERSION=1.2.2
+ENV SAMTOOLS_VERSION=1.7
+ENV PACKAGES bowtie=${BOWTIE_VERSION}* \
+ samtools=${SAMTOOLS_VERSION}*
+
+
+RUN apt-get update && \
+ apt-get install -y --no-install-recommends ${PACKAGES} && \
+ apt-get clean
diff --git a/src/docker_modules/Bowtie/1.2.2/docker_init.sh b/src/docker_modules/Bowtie/1.2.2/docker_init.sh
new file mode 100755
index 0000000..8e010a6
--- /dev/null
+++ b/src/docker_modules/Bowtie/1.2.2/docker_init.sh
@@ -0,0 +1,2 @@
+#!/bin/sh
+docker build src/docker_modules/Bowtie/1.2.2 -t 'bowtie:1.2.2'
--
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