From 92d2d77e450500c5368ee2883c6a5a54069f9113 Mon Sep 17 00:00:00 2001 From: Laurent Modolo <laurent.modolo@ens-lyon.fr> Date: Thu, 26 Jul 2018 16:21:02 +0200 Subject: [PATCH] MUSIC: add docker files --- src/docker_modules/MUSIC/6613c53/Dockerfile | 23 +++++++++++++++++++ .../MUSIC/6613c53/docker_init.sh | 2 ++ 2 files changed, 25 insertions(+) create mode 100644 src/docker_modules/MUSIC/6613c53/Dockerfile create mode 100755 src/docker_modules/MUSIC/6613c53/docker_init.sh diff --git a/src/docker_modules/MUSIC/6613c53/Dockerfile b/src/docker_modules/MUSIC/6613c53/Dockerfile new file mode 100644 index 0000000..6314ffe --- /dev/null +++ b/src/docker_modules/MUSIC/6613c53/Dockerfile @@ -0,0 +1,23 @@ +FROM ubuntu:18.04 +MAINTAINER Laurent Modolo + +ENV PACKAGES git=1:2.17* \ + build-essential=12.4* \ + ca-certificates=20180409 \ + zlib1g-dev=1:1.2.11* + +RUN apt-get update && \ + apt-get install -y --no-install-recommends ${PACKAGES} && \ + apt-get clean + +RUN git clone https://github.com/gersteinlab/MUSIC.git && \ + cd MUSIC && \ + git checkout ${MUSIC_VERSION} && \ + make clean && \ + make && \ + cd .. && \ + mv MUSIC/bin/MUSIC /usr/bin/ && \ + mv MUSIC/bin/generate_multimappability_signal.csh /usr/bin/ && \ + mv MUSIC/bin/run_MUSIC.csh /usr/bin/ && \ + rm -Rf MUSIC + diff --git a/src/docker_modules/MUSIC/6613c53/docker_init.sh b/src/docker_modules/MUSIC/6613c53/docker_init.sh new file mode 100755 index 0000000..c6163d6 --- /dev/null +++ b/src/docker_modules/MUSIC/6613c53/docker_init.sh @@ -0,0 +1,2 @@ +#!/bin/sh +docker build src/docker_modules/MUSIC/6613c53 -t 'music:6613c53' -- GitLab