diff --git a/src/1_JU28_59vs17_SNP_calling.sh b/src/1_JU28_59vs17_SNP_calling.sh index 415a58f1f851273f18b56067f4921be917178281..b31f6c51e808842858a60485b5183e2890343275 100644 --- a/src/1_JU28_59vs17_SNP_calling.sh +++ b/src/1_JU28_59vs17_SNP_calling.sh @@ -32,7 +32,7 @@ src/intersect_SNP.R \ src/intersect_SNP.R \ results/SNP/vcf_samtools/normal_sample_filtered.csv \ results/SNP/vcf_samtools/tumor_sample_filtered.csv \ - results/fasta/DBG2OLC_output2_filtered.fasta \ + results/fasta/final_assembly_filtered.fasta \ data/list_of_enzymes.csv ~/scripts/sms.sh "SNP analysis done"