From 12be019bb528ad14d5d09e92f035d0f717a1d426 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent@modolo.fr>
Date: Mon, 8 Oct 2018 18:10:48 +0200
Subject: [PATCH] bcftools: add docker file and rm from SAMtools
---
src/docker_modules/SAMtools/1.7/Dockerfile | 4 +---
src/docker_modules/bcftools/1.7/Dockerfile | 9 +++++++++
src/docker_modules/bcftools/1.7/docker_init.sh | 2 ++
3 files changed, 12 insertions(+), 3 deletions(-)
create mode 100644 src/docker_modules/bcftools/1.7/Dockerfile
create mode 100755 src/docker_modules/bcftools/1.7/docker_init.sh
diff --git a/src/docker_modules/SAMtools/1.7/Dockerfile b/src/docker_modules/SAMtools/1.7/Dockerfile
index 7dc393e..ce910af 100644
--- a/src/docker_modules/SAMtools/1.7/Dockerfile
+++ b/src/docker_modules/SAMtools/1.7/Dockerfile
@@ -2,9 +2,7 @@ FROM ubuntu:18.04
MAINTAINER Laurent Modolo
ENV SAMTOOLS_VERSION=1.7
-ENV BCFTOOLS_VERSION=1.7
-ENV PACKAGES samtools=${SAMTOOLS_VERSION}* \
- bcftools=${BCFTOOLS_VERSION}*
+ENV PACKAGES samtools=${SAMTOOLS_VERSION}*
RUN apt-get update && \
apt-get install -y --no-install-recommends ${PACKAGES} && \
diff --git a/src/docker_modules/bcftools/1.7/Dockerfile b/src/docker_modules/bcftools/1.7/Dockerfile
new file mode 100644
index 0000000..b602f18
--- /dev/null
+++ b/src/docker_modules/bcftools/1.7/Dockerfile
@@ -0,0 +1,9 @@
+FROM ubuntu:18.04
+MAINTAINER Laurent Modolo
+
+ENV BCFTOOLS_VERSION=1.7
+ENV PACKAGES bcftools=${BCFTOOLS_VERSION}*
+
+RUN apt-get update && \
+ apt-get install -y --no-install-recommends ${PACKAGES} && \
+ apt-get clean
diff --git a/src/docker_modules/bcftools/1.7/docker_init.sh b/src/docker_modules/bcftools/1.7/docker_init.sh
new file mode 100755
index 0000000..6d19c68
--- /dev/null
+++ b/src/docker_modules/bcftools/1.7/docker_init.sh
@@ -0,0 +1,2 @@
+#!/bin/sh
+docker build src/docker_modules/bcftools/1.7 -t 'bcftools:1.7'
--
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