From 051b3925509c0fe819edf17902860fdfbc8cd391 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Fri, 1 Jun 2018 15:36:20 +0200
Subject: [PATCH] UrQt: add tests

---
 src/nf_modules/UrQt/tests/tests.sh | 4 ++--
 src/nf_modules/UrQt/urqt.nf        | 1 +
 2 files changed, 3 insertions(+), 2 deletions(-)

diff --git a/src/nf_modules/UrQt/tests/tests.sh b/src/nf_modules/UrQt/tests/tests.sh
index 49099e2..ebad731 100644
--- a/src/nf_modules/UrQt/tests/tests.sh
+++ b/src/nf_modules/UrQt/tests/tests.sh
@@ -1,9 +1,9 @@
 nextflow src/nf_modules/UrQt/tests/trimming_paired.nf \
-  -c src/nf_modules/UrQt/UrQt.config \
+  -c src/nf_modules/UrQt/urqt.config \
   -profile docker \
   --fastq "data/tiny_dataset/fastq/tiny_R{1,2}.fastq"
 
 nextflow src/nf_modules/UrQt/tests/trimming_single.nf \
-  -c src/nf_modules/UrQt/UrQt.config \
+  -c src/nf_modules/UrQt/urqt.config \
   -profile docker \
   --fastq "data/tiny_dataset/fastq/tiny_R{1,2}.fastq"
diff --git a/src/nf_modules/UrQt/urqt.nf b/src/nf_modules/UrQt/urqt.nf
index 4c0d07c..87a3728 100644
--- a/src/nf_modules/UrQt/urqt.nf
+++ b/src/nf_modules/UrQt/urqt.nf
@@ -62,6 +62,7 @@ process trimming {
 
   script:
 """
+
 UrQt --t 20 --m ${task.cpus} --gz \
 --in ${reads} \
 --out ${reads.baseName}_trim.fastq.gz \
-- 
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