From 03ab1966a257b05413f0a1c75b2a38da6e295fb9 Mon Sep 17 00:00:00 2001
From: elabaron <emmanuel.labaronne@ens-lyon.fr>
Date: Wed, 6 Jun 2018 13:30:27 +0000
Subject: [PATCH] sampler_fasta.nf : add sample name in the output
---
src/fasta_sampler.nf | 4 ++--
1 file changed, 2 insertions(+), 2 deletions(-)
diff --git a/src/fasta_sampler.nf b/src/fasta_sampler.nf
index ab6f36a..d1200ed 100644
--- a/src/fasta_sampler.nf
+++ b/src/fasta_sampler.nf
@@ -9,10 +9,10 @@ process sample_fasta {
file fasta from fasta_file
output:
-file "sample.fasta" into fasta_sample
+file "*_sample.fasta" into fasta_sample
script:
"""
-head ${fasta} > sample.fasta
+head ${fasta} > ${fasta.baseName}_sample.fasta
"""
}
--
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