Commits · master · mshamjal / nextflow

17 Jan, 2020 17 commits
- Update src/RNASeq.nf · 3dad2974
  mshamjal authored Jan 17, 2020
  
  3dad2974
- Update src/RNASeq.config · e2f38aea
  mshamjal authored Jan 17, 2020
  
  e2f38aea
- Update src/RNASeq.nf · 07389c34
  mshamjal authored Jan 17, 2020
  
  07389c34
- Update src/RNASeq.config · 036e0ce3
  mshamjal authored Jan 17, 2020
  
  036e0ce3
- Update src/RNASeq.nf · 5760ef83
  mshamjal authored Jan 17, 2020
  
  5760ef83
- Update src/RNASeq.nf · 62032c1d
  mshamjal authored Jan 17, 2020
  
  62032c1d
- Update src/RNASeq.config · a4c32db4
  mshamjal authored Jan 17, 2020
  
  a4c32db4
- Update src/RNASeq.nf · 767d1c0b
  mshamjal authored Jan 17, 2020
  
  767d1c0b
- Update src/RNASeq.config · 6525ec2e
  mshamjal authored Jan 17, 2020
  
  6525ec2e
- Update src/RNASeq.config · 9f695e5c
  mshamjal authored Jan 17, 2020
  
  9f695e5c
- Creat RNAseq.nf · 27f120f5
  mshamjal authored Jan 17, 2020
  
  27f120f5
- Merge branch 'master' of gitlab_lbmc:mshamjal/nextflow · 4855fbfb
  Mehrnaz Shamalnasab authored Jan 17, 2020
  
  4855fbfb
- fasta_sampler.nf:variable output name · c6c9c83f
  mshamjal authored Jan 17, 2020
  
  c6c9c83f
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · 3a79ed53
  Mehrnaz Shamalnasab authored Jan 17, 2020
  
  3a79ed53
- TP_experimental_biologists.md fix url typo · f1ca9e09
  Laurent Modolo authored Jan 17, 2020
  
  f1ca9e09
- get sample result · dbf4d36c
  mshamjal authored Jan 17, 2020
  
  dbf4d36c
- creat fasta sampler · 50ceb4d5
  mshamjal authored Jan 17, 2020
  
  50ceb4d5
13 Jan, 2020 2 commits
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · efc06486
  Laurent Modolo authored Jan 13, 2020
  
  efc06486
- update mail message · 14ff8205
  Laurent Modolo authored Jan 13, 2020
  
  14ff8205
08 Jan, 2020 1 commit
- umi_tools: Dockerfile, fix dependences · 6fa60ca9
  Laurent Modolo authored Jan 08, 2020
  
  6fa60ca9
07 Jan, 2020 1 commit
- TP_experimental_biologists.md: add login information · f10df508
  Laurent Modolo authored Jan 07, 2020
  
  f10df508
13 Dec, 2019 2 commits
- cutadapt: config change version from 2.1 to 2.4 · 2b14934b
  Laurent Modolo authored Dec 13, 2019
  
  2b14934b
- fasta_from_bed.config: remove ${CONDA_ENVS} · 05e1de4c
  Laurent Modolo authored Dec 13, 2019
  
  05e1de4c
09 Dec, 2019 5 commits
- update TP_experimental_biologists.md with pipe 0.4.0 · 1eb1809e
  Laurent Modolo authored Dec 09, 2019
  
  1eb1809e
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · ceb966cb
  Laurent Modolo authored Dec 09, 2019
  
  ceb966cb
- update mail.txt · a0256b9e
  Laurent Modolo authored Dec 09, 2019
  
  a0256b9e
- psmn: fix gatk3.8.0 env name · b8dafbb8
  Laurent Modolo authored Dec 09, 2019
  
  b8dafbb8
- docker: gatk3 fix licence problem · 9bf9ce0e
  Laurent Modolo authored Dec 09, 2019
  
  9bf9ce0e
06 Dec, 2019 4 commits
- MERGE · d3042117
  Laurent Modolo authored Dec 06, 2019
  
  d3042117
- conda: add psmn links · c30f9337
  Laurent Modolo authored Dec 06, 2019
  
  c30f9337
- conda_packages.sh: add gatk4 · 46f9f194
  Laurent Modolo authored Dec 06, 2019
  
  46f9f194
- docker_modules: add gatk3.8.0 · eb29dd1f
  Laurent Modolo authored Dec 06, 2019
  
  eb29dd1f
28 Nov, 2019 8 commits
- training_dataset.config: remove mail alert from ccin2p3 · 3efbbb5e
  Laurent Modolo authored Nov 28, 2019
  
  3efbbb5e
- in2p3.pbs: fix work for nf · 42b7c647
  Laurent Modolo authored Nov 28, 2019
  
  42b7c647
- training_dataset.config: add mail report · 4abd43f1
  Laurent Modolo authored Nov 28, 2019
  
  4abd43f1
- singularity in2p3: fix symlink · 2e7b99ec
  Laurent Modolo authored Nov 28, 2019
  
  2e7b99ec
- training_dataset.config: final fix for in2p3 cacheDir · 5a8a415b
  Laurent Modolo authored Nov 28, 2019
  
  5a8a415b
- in2p3.pbs: fix files path · 40e33e80
  Laurent Modolo authored Nov 28, 2019
  
  40e33e80
- .update_config.sh: fix singularity cacheDir path for in2p3 · 746d0619
  Laurent Modolo authored Nov 28, 2019
  
  746d0619
- *.config: fix singularity cacheDir path for in2p3 · 30b52060
  Laurent Modolo authored Nov 28, 2019
  
  30b52060