From 823d23356eb40e1b8f11a5b9c918e68f2c997d32 Mon Sep 17 00:00:00 2001
From: mshamjal <113-mshamjal@users.noreply.gitlab.biologie.ens-lyon.fr>
Date: Fri, 17 Jan 2020 13:38:02 +0000
Subject: [PATCH] creat fasta sampler
---
src/fasta_sampler.nf | 16 ++++++++++++++++
1 file changed, 16 insertions(+)
create mode 100644 src/fasta_sampler.nf
diff --git a/src/fasta_sampler.nf b/src/fasta_sampler.nf
new file mode 100644
index 0000000..5b7135d
--- /dev/null
+++ b/src/fasta_sampler.nf
@@ -0,0 +1,16 @@
+Channel
+ .fromPath( "data/tiny_dataset/fasta/*.fasta" )
+ .set { fasta_file }
+
+process sample_fasta {
+ input:
+file fasta from fasta_file
+
+ output:
+file "sample.fasta" into fasta_sample
+
+ script:
+"""
+head ${fasta} > sample.fasta
+"""
+}
\ No newline at end of file
--
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