diff --git a/covid_comp_dataset.Rnw b/covid_comp_dataset.Rnw index 0d4ae146c774abd91a1dc58883816f7ad153bae8..50497236412da61b5c6d1708b81c25960ec24246 100644 --- a/covid_comp_dataset.Rnw +++ b/covid_comp_dataset.Rnw @@ -74,8 +74,9 @@ plot(x,y, xlab="bpp omega primate", ylab="bpp omega bats", cex=0.5) abline(0,1) abline(lm(y~x), col="red") -text(x[x>0.5 &y<0.4], (y[x>0.5 &y<0.4]+0.01), names(x)[x>0.5 &y<0.4]) -text(x[x<0.45 &y>0.45], (y[x<0.45 &y>0.45]+0.01), names(x)[x<0.45 &y>0.45]) +text(x[x>0.5 &y<0.4], (y[x>0.5 &y<0.4]+0.01), names(x)[x>0.5 &y<0.4], cex=0.7) +text(x[x<0.45 &y>0.45], (y[x<0.45 &y>0.45]+0.01), names(x)[x<0.45 &y>0.45], cex=0.7) +text(x[x>0.45 &y>0.4], (y[x>0.45 &y>0.4]+0.01), names(x)[x>0.45 &y>0.4], cex=0.7) @ diff --git a/covid_comp_dataset.pdf b/covid_comp_dataset.pdf index 66eefb2d592e5715ed5c127552211187e3278092..37591cdac73e60769156f51add05788c9a09e198 100644 Binary files a/covid_comp_dataset.pdf and b/covid_comp_dataset.pdf differ diff --git a/covid_comp_dataset.tex b/covid_comp_dataset.tex index 0672a1f8d93e217766ac9f4c9a0af1b2a7de0469..b32dd9a7f4693cbc036e5b2a7f54c75d1098b042 100644 --- a/covid_comp_dataset.tex +++ b/covid_comp_dataset.tex @@ -152,8 +152,9 @@ Analysis were formatted by the script covid\_comp\_script0\_table.Rnw. \hlkwd{abline}\hlstd{(}\hlnum{0}\hlstd{,}\hlnum{1}\hlstd{)} \hlkwd{abline}\hlstd{(}\hlkwd{lm}\hlstd{(y}\hlopt{~}\hlstd{x),} \hlkwc{col}\hlstd{=}\hlstr{"red"}\hlstd{)} -\hlkwd{text}\hlstd{(x[x}\hlopt{>}\hlnum{0.5} \hlopt{&}\hlstd{y}\hlopt{<}\hlnum{0.4}\hlstd{], (y[x}\hlopt{>}\hlnum{0.5} \hlopt{&}\hlstd{y}\hlopt{<}\hlnum{0.4}\hlstd{]}\hlopt{+}\hlnum{0.01}\hlstd{),} \hlkwd{names}\hlstd{(x)[x}\hlopt{>}\hlnum{0.5} \hlopt{&}\hlstd{y}\hlopt{<}\hlnum{0.4}\hlstd{])} -\hlkwd{text}\hlstd{(x[x}\hlopt{<}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.45}\hlstd{], (y[x}\hlopt{<}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.45}\hlstd{]}\hlopt{+}\hlnum{0.01}\hlstd{),} \hlkwd{names}\hlstd{(x)[x}\hlopt{<}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.45}\hlstd{])} +\hlkwd{text}\hlstd{(x[x}\hlopt{>}\hlnum{0.5} \hlopt{&}\hlstd{y}\hlopt{<}\hlnum{0.4}\hlstd{], (y[x}\hlopt{>}\hlnum{0.5} \hlopt{&}\hlstd{y}\hlopt{<}\hlnum{0.4}\hlstd{]}\hlopt{+}\hlnum{0.01}\hlstd{),} \hlkwd{names}\hlstd{(x)[x}\hlopt{>}\hlnum{0.5} \hlopt{&}\hlstd{y}\hlopt{<}\hlnum{0.4}\hlstd{],} \hlkwc{cex}\hlstd{=}\hlnum{0.7}\hlstd{)} +\hlkwd{text}\hlstd{(x[x}\hlopt{<}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.45}\hlstd{], (y[x}\hlopt{<}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.45}\hlstd{]}\hlopt{+}\hlnum{0.01}\hlstd{),} \hlkwd{names}\hlstd{(x)[x}\hlopt{<}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.45}\hlstd{],} \hlkwc{cex}\hlstd{=}\hlnum{0.7}\hlstd{)} +\hlkwd{text}\hlstd{(x[x}\hlopt{>}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.4}\hlstd{], (y[x}\hlopt{>}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.4}\hlstd{]}\hlopt{+}\hlnum{0.01}\hlstd{),} \hlkwd{names}\hlstd{(x)[x}\hlopt{>}\hlnum{0.45} \hlopt{&}\hlstd{y}\hlopt{>}\hlnum{0.4}\hlstd{],} \hlkwc{cex}\hlstd{=}\hlnum{0.7}\hlstd{)} \end{alltt} \end{kframe} \includegraphics[width=\maxwidth]{figure/unnamed-chunk-3-1} diff --git a/figure/mondrianbats-1.pdf b/figure/mondrianbats-1.pdf index 6cdc7c6221f566c3d97d22d936bb742860800117..b941f9a7ec7fa7e6f85c42703b59bc4af92f2382 100644 Binary files a/figure/mondrianbats-1.pdf and b/figure/mondrianbats-1.pdf differ diff --git a/figure/mondrianbats-2.pdf b/figure/mondrianbats-2.pdf index c76f91a9112fde9ff4202d23f214ed0a54a7cc72..3512138bcc7ea7501e2db70f980a826e5316aeff 100644 Binary files a/figure/mondrianbats-2.pdf and b/figure/mondrianbats-2.pdf differ diff --git a/figure/subsetbats-1.pdf b/figure/subsetbats-1.pdf index 86b40a4beca2db9765d27956d72c2e02ba2e6ec5..96dae84ba4733d1ef7b1e0c67ca05f23eb6c1b43 100644 Binary files a/figure/subsetbats-1.pdf and b/figure/subsetbats-1.pdf differ diff --git a/figure/subsetbats-2.pdf b/figure/subsetbats-2.pdf index a0a2e70478231133aa91883854d4d994d5eceb87..cf4cffe7cd14d9f6fd9a1cda317079a9152384bc 100644 Binary files a/figure/subsetbats-2.pdf and b/figure/subsetbats-2.pdf differ diff --git a/figure/subsetbats-3.pdf b/figure/subsetbats-3.pdf index ff3ff7b39766e894f658850514759028e741a325..8c630df5848249bdacb3658878b7bacd5be68700 100644 Binary files a/figure/subsetbats-3.pdf and b/figure/subsetbats-3.pdf differ diff --git a/figure/tablo-1.pdf b/figure/tablo-1.pdf index af3e4b22022685aa4fccde11c9ff905f06eeff7d..108e006722ae5c7384879c3b274a1de78877d9f7 100644 Binary files a/figure/tablo-1.pdf and b/figure/tablo-1.pdf differ diff --git a/figure/unnamed-chunk-3-1.pdf b/figure/unnamed-chunk-3-1.pdf index 53cad1ed355c9139cf4847392722984a5a5a6fd1..5df305383e0d69dd3899e3342420fce4f6760620 100644 Binary files a/figure/unnamed-chunk-3-1.pdf and b/figure/unnamed-chunk-3-1.pdf differ