From 231fd9e6a361a8095f07f32ce8c42b69f9409f8f Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Mon, 4 Mar 2019 10:40:18 +0100
Subject: [PATCH] rename module to lowercase
---
src/docker_modules/{BEDtools => bedtools}/2.25.0/Dockerfile | 0
src/docker_modules/{BEDtools => bedtools}/2.25.0/docker_init.sh | 0
src/docker_modules/{Bowtie => bowtie}/1.2.2/Dockerfile | 0
src/docker_modules/{Bowtie => bowtie}/1.2.2/docker_init.sh | 0
src/docker_modules/{Bowtie2 => bowtie2}/2.3.4.1/Dockerfile | 0
src/docker_modules/{Bowtie2 => bowtie2}/2.3.4.1/docker_init.sh | 0
src/docker_modules/{BWA => bwa}/0.7.17/Dockerfile | 0
src/docker_modules/{BWA => bwa}/0.7.17/docker_init.sh | 0
src/docker_modules/{deepTools => deeptools}/3.0.2/Dockerfile | 0
src/docker_modules/{deepTools => deeptools}/3.0.2/docker_init.sh | 0
src/docker_modules/{deepTools => deeptools}/3.1.1/Dockerfile | 0
src/docker_modules/{deepTools => deeptools}/3.1.1/docker_init.sh | 0
src/docker_modules/{FastQC => fastqc}/0.11.5/Dockerfile | 0
src/docker_modules/{FastQC => fastqc}/0.11.5/docker_init.sh | 0
src/docker_modules/{GATK => gatk}/4.0.8.1/Dockerfile | 0
src/docker_modules/{GATK => gatk}/4.0.8.1/docker_init.sh | 0
src/docker_modules/{HISAT2 => hisat2}/2.0.0/Dockerfile | 0
src/docker_modules/{HISAT2 => hisat2}/2.0.0/docker_init.sh | 0
src/docker_modules/{HTSeq => htseq}/0.8.0/Dockerfile | 0
src/docker_modules/{HTSeq => htseq}/0.8.0/docker_init.sh | 0
src/docker_modules/{Kallisto => kallisto}/0.43.1/Dockerfile | 0
src/docker_modules/{Kallisto => kallisto}/0.43.1/docker_init.sh | 0
src/docker_modules/{Kallisto => kallisto}/0.44.0/Dockerfile | 0
src/docker_modules/{Kallisto => kallisto}/0.44.0/docker_init.sh | 0
src/docker_modules/{MACS2 => macs2}/2.1.0/Dockerfile | 0
src/docker_modules/{MACS2 => macs2}/2.1.0/docker_init.sh | 0
src/docker_modules/{MultiQC => multiqc}/1.0/Dockerfile | 0
src/docker_modules/{MultiQC => multiqc}/1.0/docker_init.sh | 0
src/docker_modules/{MUSIC => music}/6613c53/Dockerfile | 0
src/docker_modules/{MUSIC => music}/6613c53/docker_init.sh | 0
src/docker_modules/{RSEM => rsem}/1.3.0/Dockerfile | 0
src/docker_modules/{RSEM => rsem}/1.3.0/docker_init.sh | 0
src/docker_modules/{Salmon => salmon}/0.8.2/Dockerfile | 0
src/docker_modules/{Salmon => salmon}/0.8.2/docker_init.sh | 0
src/docker_modules/{SAMtools => samtools}/1.7/Dockerfile | 0
src/docker_modules/{SAMtools => samtools}/1.7/docker_init.sh | 0
src/docker_modules/{SRAtoolkit => sratoolkit}/2.8.2/Dockerfile | 0
.../{SRAtoolkit => sratoolkit}/2.8.2/docker_init.sh | 0
src/docker_modules/{TopHat => tophat}/2.1.1/Dockerfile | 0
src/docker_modules/{TopHat => tophat}/2.1.1/docker_init.sh | 0
src/docker_modules/{Trimmomatic => trimmomatic}/0.36/Dockerfile | 0
.../{Trimmomatic => trimmomatic}/0.36/docker_init.sh | 0
src/docker_modules/{UrQt => urqt}/d62c1f8/Dockerfile | 0
src/docker_modules/{UrQt => urqt}/d62c1f8/docker_init.sh | 0
src/nf_modules/{BEDtools => bedtools}/fasta_from_bed.config | 0
src/nf_modules/{BEDtools => bedtools}/fasta_from_bed.nf | 0
src/nf_modules/{BEDtools => bedtools}/tests.sh | 0
src/nf_modules/{Bowtie => bowtie}/indexing.config | 0
src/nf_modules/{Bowtie => bowtie}/indexing.nf | 0
src/nf_modules/{Bowtie => bowtie}/mapping_paired.config | 0
src/nf_modules/{Bowtie => bowtie}/mapping_paired.nf | 0
src/nf_modules/{Bowtie => bowtie}/mapping_single.config | 0
src/nf_modules/{Bowtie => bowtie}/mapping_single.nf | 0
src/nf_modules/{Bowtie => bowtie}/tests.sh | 0
src/nf_modules/{Bowtie2 => bowtie2}/indexing.config | 0
src/nf_modules/{Bowtie2 => bowtie2}/indexing.nf | 0
src/nf_modules/{Bowtie2 => bowtie2}/mapping_paired.config | 0
src/nf_modules/{Bowtie2 => bowtie2}/mapping_paired.nf | 0
src/nf_modules/{Bowtie2 => bowtie2}/mapping_single.config | 0
src/nf_modules/{Bowtie2 => bowtie2}/mapping_single.nf | 0
src/nf_modules/{Bowtie2 => bowtie2}/tests.sh | 0
src/nf_modules/{BWA => bwa}/indexing.config | 0
src/nf_modules/{BWA => bwa}/indexing.nf | 0
src/nf_modules/{BWA => bwa}/mapping_paired.config | 0
src/nf_modules/{BWA => bwa}/mapping_paired.nf | 0
src/nf_modules/{BWA => bwa}/tests.sh | 0
src/nf_modules/{deepTools => deeptools}/bam_to_bigwig.config | 0
src/nf_modules/{deepTools => deeptools}/bam_to_bigwig.nf | 0
src/nf_modules/{deepTools => deeptools}/compute_matrix.config | 0
src/nf_modules/{deepTools => deeptools}/compute_matrix.nf | 0
src/nf_modules/{deepTools => deeptools}/plot_profile.config | 0
src/nf_modules/{deepTools => deeptools}/plot_profile.nf | 0
src/nf_modules/{deepTools => deeptools}/tests.sh | 0
src/nf_modules/{FastQC => fastqc}/fastqc_paired.config | 0
src/nf_modules/{FastQC => fastqc}/fastqc_paired.nf | 0
src/nf_modules/{FastQC => fastqc}/fastqc_single.config | 0
src/nf_modules/{FastQC => fastqc}/fastqc_single.nf | 0
src/nf_modules/{FastQC => fastqc}/tests.sh | 0
src/nf_modules/{HTSeq => htseq}/htseq.config | 0
src/nf_modules/{HTSeq => htseq}/htseq.nf | 0
src/nf_modules/{HTSeq => htseq}/tests.sh | 0
src/nf_modules/{Kallisto => kallisto}/indexing.config | 0
src/nf_modules/{Kallisto => kallisto}/indexing.nf | 0
src/nf_modules/{Kallisto => kallisto}/mapping_paired.config | 0
src/nf_modules/{Kallisto => kallisto}/mapping_paired.nf | 0
src/nf_modules/{Kallisto => kallisto}/mapping_single.config | 0
src/nf_modules/{Kallisto => kallisto}/mapping_single.nf | 0
src/nf_modules/{Kallisto => kallisto}/tests.sh | 0
src/nf_modules/{MultiQC => multiqc}/multiqc_paired.config | 0
src/nf_modules/{MultiQC => multiqc}/multiqc_paired.nf | 0
src/nf_modules/{MultiQC => multiqc}/multiqc_single.config | 0
src/nf_modules/{MultiQC => multiqc}/multiqc_single.nf | 0
src/nf_modules/{MultiQC => multiqc}/tests.sh | 0
src/nf_modules/{MUSIC => music}/peak_calling_single.config | 0
src/nf_modules/{MUSIC => music}/peak_calling_single.nf | 0
src/nf_modules/{MUSIC => music}/tests.sh | 0
src/nf_modules/{RSEM => rsem}/indexing.config | 0
src/nf_modules/{RSEM => rsem}/indexing.nf | 0
src/nf_modules/{RSEM => rsem}/quantification_paired.config | 0
src/nf_modules/{RSEM => rsem}/quantification_paired.nf | 0
src/nf_modules/{RSEM => rsem}/quantification_single.config | 0
src/nf_modules/{RSEM => rsem}/quantification_single.nf | 0
src/nf_modules/{RSEM => rsem}/tests.sh | 0
src/nf_modules/{SAMtools => samtools}/filter_bams.config | 0
src/nf_modules/{SAMtools => samtools}/filter_bams.nf | 0
src/nf_modules/{SAMtools => samtools}/index_bams.config | 0
src/nf_modules/{SAMtools => samtools}/index_bams.nf | 0
src/nf_modules/{SAMtools => samtools}/sort_bams.config | 0
src/nf_modules/{SAMtools => samtools}/sort_bams.nf | 0
src/nf_modules/{SAMtools => samtools}/split_bams.config | 0
src/nf_modules/{SAMtools => samtools}/split_bams.nf | 0
src/nf_modules/{SAMtools => samtools}/tests.sh | 0
src/nf_modules/{SRAtoolkit => sratoolkit}/fastqdump.config | 0
src/nf_modules/{SRAtoolkit => sratoolkit}/fastqdump.nf | 0
src/nf_modules/{SRAtoolkit => sratoolkit}/list-srr.txt | 0
src/nf_modules/{SRAtoolkit => sratoolkit}/tests.sh | 0
src/nf_modules/{UrQt => urqt}/tests.sh | 0
src/nf_modules/{UrQt => urqt}/trimming_paired.config | 0
src/nf_modules/{UrQt => urqt}/trimming_paired.nf | 0
src/nf_modules/{UrQt => urqt}/trimming_single.config | 0
src/nf_modules/{UrQt => urqt}/trimming_single.nf | 0
.../{BEDtools => bedtools}/2.25.0/BEDtools.def | 0
src/singularity_modules/{BEDtools => bedtools}/2.25.0/build.sh | 0
src/singularity_modules/{Bowtie => bowtie}/1.2.2/Bowtie.def | 0
src/singularity_modules/{Bowtie => bowtie}/1.2.2/build.sh | 0
src/singularity_modules/{Bowtie2 => bowtie2}/2.3.4.1/Bowtie2.def | 0
src/singularity_modules/{Bowtie2 => bowtie2}/2.3.4.1/build.sh | 0
src/singularity_modules/{BWA => bwa}/0.7.17/BWA.def | 0
src/singularity_modules/{BWA => bwa}/0.7.17/build.sh | 0
129 files changed, 0 insertions(+), 0 deletions(-)
rename src/docker_modules/{BEDtools => bedtools}/2.25.0/Dockerfile (100%)
rename src/docker_modules/{BEDtools => bedtools}/2.25.0/docker_init.sh (100%)
rename src/docker_modules/{Bowtie => bowtie}/1.2.2/Dockerfile (100%)
rename src/docker_modules/{Bowtie => bowtie}/1.2.2/docker_init.sh (100%)
rename src/docker_modules/{Bowtie2 => bowtie2}/2.3.4.1/Dockerfile (100%)
rename src/docker_modules/{Bowtie2 => bowtie2}/2.3.4.1/docker_init.sh (100%)
rename src/docker_modules/{BWA => bwa}/0.7.17/Dockerfile (100%)
rename src/docker_modules/{BWA => bwa}/0.7.17/docker_init.sh (100%)
rename src/docker_modules/{deepTools => deeptools}/3.0.2/Dockerfile (100%)
rename src/docker_modules/{deepTools => deeptools}/3.0.2/docker_init.sh (100%)
rename src/docker_modules/{deepTools => deeptools}/3.1.1/Dockerfile (100%)
rename src/docker_modules/{deepTools => deeptools}/3.1.1/docker_init.sh (100%)
rename src/docker_modules/{FastQC => fastqc}/0.11.5/Dockerfile (100%)
rename src/docker_modules/{FastQC => fastqc}/0.11.5/docker_init.sh (100%)
rename src/docker_modules/{GATK => gatk}/4.0.8.1/Dockerfile (100%)
rename src/docker_modules/{GATK => gatk}/4.0.8.1/docker_init.sh (100%)
rename src/docker_modules/{HISAT2 => hisat2}/2.0.0/Dockerfile (100%)
rename src/docker_modules/{HISAT2 => hisat2}/2.0.0/docker_init.sh (100%)
rename src/docker_modules/{HTSeq => htseq}/0.8.0/Dockerfile (100%)
rename src/docker_modules/{HTSeq => htseq}/0.8.0/docker_init.sh (100%)
rename src/docker_modules/{Kallisto => kallisto}/0.43.1/Dockerfile (100%)
rename src/docker_modules/{Kallisto => kallisto}/0.43.1/docker_init.sh (100%)
rename src/docker_modules/{Kallisto => kallisto}/0.44.0/Dockerfile (100%)
rename src/docker_modules/{Kallisto => kallisto}/0.44.0/docker_init.sh (100%)
rename src/docker_modules/{MACS2 => macs2}/2.1.0/Dockerfile (100%)
rename src/docker_modules/{MACS2 => macs2}/2.1.0/docker_init.sh (100%)
rename src/docker_modules/{MultiQC => multiqc}/1.0/Dockerfile (100%)
rename src/docker_modules/{MultiQC => multiqc}/1.0/docker_init.sh (100%)
rename src/docker_modules/{MUSIC => music}/6613c53/Dockerfile (100%)
rename src/docker_modules/{MUSIC => music}/6613c53/docker_init.sh (100%)
rename src/docker_modules/{RSEM => rsem}/1.3.0/Dockerfile (100%)
rename src/docker_modules/{RSEM => rsem}/1.3.0/docker_init.sh (100%)
rename src/docker_modules/{Salmon => salmon}/0.8.2/Dockerfile (100%)
rename src/docker_modules/{Salmon => salmon}/0.8.2/docker_init.sh (100%)
rename src/docker_modules/{SAMtools => samtools}/1.7/Dockerfile (100%)
rename src/docker_modules/{SAMtools => samtools}/1.7/docker_init.sh (100%)
rename src/docker_modules/{SRAtoolkit => sratoolkit}/2.8.2/Dockerfile (100%)
rename src/docker_modules/{SRAtoolkit => sratoolkit}/2.8.2/docker_init.sh (100%)
rename src/docker_modules/{TopHat => tophat}/2.1.1/Dockerfile (100%)
rename src/docker_modules/{TopHat => tophat}/2.1.1/docker_init.sh (100%)
rename src/docker_modules/{Trimmomatic => trimmomatic}/0.36/Dockerfile (100%)
rename src/docker_modules/{Trimmomatic => trimmomatic}/0.36/docker_init.sh (100%)
rename src/docker_modules/{UrQt => urqt}/d62c1f8/Dockerfile (100%)
rename src/docker_modules/{UrQt => urqt}/d62c1f8/docker_init.sh (100%)
rename src/nf_modules/{BEDtools => bedtools}/fasta_from_bed.config (100%)
rename src/nf_modules/{BEDtools => bedtools}/fasta_from_bed.nf (100%)
rename src/nf_modules/{BEDtools => bedtools}/tests.sh (100%)
rename src/nf_modules/{Bowtie => bowtie}/indexing.config (100%)
rename src/nf_modules/{Bowtie => bowtie}/indexing.nf (100%)
rename src/nf_modules/{Bowtie => bowtie}/mapping_paired.config (100%)
rename src/nf_modules/{Bowtie => bowtie}/mapping_paired.nf (100%)
rename src/nf_modules/{Bowtie => bowtie}/mapping_single.config (100%)
rename src/nf_modules/{Bowtie => bowtie}/mapping_single.nf (100%)
rename src/nf_modules/{Bowtie => bowtie}/tests.sh (100%)
rename src/nf_modules/{Bowtie2 => bowtie2}/indexing.config (100%)
rename src/nf_modules/{Bowtie2 => bowtie2}/indexing.nf (100%)
rename src/nf_modules/{Bowtie2 => bowtie2}/mapping_paired.config (100%)
rename src/nf_modules/{Bowtie2 => bowtie2}/mapping_paired.nf (100%)
rename src/nf_modules/{Bowtie2 => bowtie2}/mapping_single.config (100%)
rename src/nf_modules/{Bowtie2 => bowtie2}/mapping_single.nf (100%)
rename src/nf_modules/{Bowtie2 => bowtie2}/tests.sh (100%)
rename src/nf_modules/{BWA => bwa}/indexing.config (100%)
rename src/nf_modules/{BWA => bwa}/indexing.nf (100%)
rename src/nf_modules/{BWA => bwa}/mapping_paired.config (100%)
rename src/nf_modules/{BWA => bwa}/mapping_paired.nf (100%)
rename src/nf_modules/{BWA => bwa}/tests.sh (100%)
rename src/nf_modules/{deepTools => deeptools}/bam_to_bigwig.config (100%)
rename src/nf_modules/{deepTools => deeptools}/bam_to_bigwig.nf (100%)
rename src/nf_modules/{deepTools => deeptools}/compute_matrix.config (100%)
rename src/nf_modules/{deepTools => deeptools}/compute_matrix.nf (100%)
rename src/nf_modules/{deepTools => deeptools}/plot_profile.config (100%)
rename src/nf_modules/{deepTools => deeptools}/plot_profile.nf (100%)
rename src/nf_modules/{deepTools => deeptools}/tests.sh (100%)
rename src/nf_modules/{FastQC => fastqc}/fastqc_paired.config (100%)
rename src/nf_modules/{FastQC => fastqc}/fastqc_paired.nf (100%)
rename src/nf_modules/{FastQC => fastqc}/fastqc_single.config (100%)
rename src/nf_modules/{FastQC => fastqc}/fastqc_single.nf (100%)
rename src/nf_modules/{FastQC => fastqc}/tests.sh (100%)
rename src/nf_modules/{HTSeq => htseq}/htseq.config (100%)
rename src/nf_modules/{HTSeq => htseq}/htseq.nf (100%)
rename src/nf_modules/{HTSeq => htseq}/tests.sh (100%)
rename src/nf_modules/{Kallisto => kallisto}/indexing.config (100%)
rename src/nf_modules/{Kallisto => kallisto}/indexing.nf (100%)
rename src/nf_modules/{Kallisto => kallisto}/mapping_paired.config (100%)
rename src/nf_modules/{Kallisto => kallisto}/mapping_paired.nf (100%)
rename src/nf_modules/{Kallisto => kallisto}/mapping_single.config (100%)
rename src/nf_modules/{Kallisto => kallisto}/mapping_single.nf (100%)
rename src/nf_modules/{Kallisto => kallisto}/tests.sh (100%)
rename src/nf_modules/{MultiQC => multiqc}/multiqc_paired.config (100%)
rename src/nf_modules/{MultiQC => multiqc}/multiqc_paired.nf (100%)
rename src/nf_modules/{MultiQC => multiqc}/multiqc_single.config (100%)
rename src/nf_modules/{MultiQC => multiqc}/multiqc_single.nf (100%)
rename src/nf_modules/{MultiQC => multiqc}/tests.sh (100%)
rename src/nf_modules/{MUSIC => music}/peak_calling_single.config (100%)
rename src/nf_modules/{MUSIC => music}/peak_calling_single.nf (100%)
rename src/nf_modules/{MUSIC => music}/tests.sh (100%)
rename src/nf_modules/{RSEM => rsem}/indexing.config (100%)
rename src/nf_modules/{RSEM => rsem}/indexing.nf (100%)
rename src/nf_modules/{RSEM => rsem}/quantification_paired.config (100%)
rename src/nf_modules/{RSEM => rsem}/quantification_paired.nf (100%)
rename src/nf_modules/{RSEM => rsem}/quantification_single.config (100%)
rename src/nf_modules/{RSEM => rsem}/quantification_single.nf (100%)
rename src/nf_modules/{RSEM => rsem}/tests.sh (100%)
rename src/nf_modules/{SAMtools => samtools}/filter_bams.config (100%)
rename src/nf_modules/{SAMtools => samtools}/filter_bams.nf (100%)
rename src/nf_modules/{SAMtools => samtools}/index_bams.config (100%)
rename src/nf_modules/{SAMtools => samtools}/index_bams.nf (100%)
rename src/nf_modules/{SAMtools => samtools}/sort_bams.config (100%)
rename src/nf_modules/{SAMtools => samtools}/sort_bams.nf (100%)
rename src/nf_modules/{SAMtools => samtools}/split_bams.config (100%)
rename src/nf_modules/{SAMtools => samtools}/split_bams.nf (100%)
rename src/nf_modules/{SAMtools => samtools}/tests.sh (100%)
rename src/nf_modules/{SRAtoolkit => sratoolkit}/fastqdump.config (100%)
rename src/nf_modules/{SRAtoolkit => sratoolkit}/fastqdump.nf (100%)
rename src/nf_modules/{SRAtoolkit => sratoolkit}/list-srr.txt (100%)
rename src/nf_modules/{SRAtoolkit => sratoolkit}/tests.sh (100%)
rename src/nf_modules/{UrQt => urqt}/tests.sh (100%)
rename src/nf_modules/{UrQt => urqt}/trimming_paired.config (100%)
rename src/nf_modules/{UrQt => urqt}/trimming_paired.nf (100%)
rename src/nf_modules/{UrQt => urqt}/trimming_single.config (100%)
rename src/nf_modules/{UrQt => urqt}/trimming_single.nf (100%)
rename src/singularity_modules/{BEDtools => bedtools}/2.25.0/BEDtools.def (100%)
rename src/singularity_modules/{BEDtools => bedtools}/2.25.0/build.sh (100%)
rename src/singularity_modules/{Bowtie => bowtie}/1.2.2/Bowtie.def (100%)
rename src/singularity_modules/{Bowtie => bowtie}/1.2.2/build.sh (100%)
rename src/singularity_modules/{Bowtie2 => bowtie2}/2.3.4.1/Bowtie2.def (100%)
rename src/singularity_modules/{Bowtie2 => bowtie2}/2.3.4.1/build.sh (100%)
rename src/singularity_modules/{BWA => bwa}/0.7.17/BWA.def (100%)
rename src/singularity_modules/{BWA => bwa}/0.7.17/build.sh (100%)
diff --git a/src/docker_modules/BEDtools/2.25.0/Dockerfile b/src/docker_modules/bedtools/2.25.0/Dockerfile
similarity index 100%
rename from src/docker_modules/BEDtools/2.25.0/Dockerfile
rename to src/docker_modules/bedtools/2.25.0/Dockerfile
diff --git a/src/docker_modules/BEDtools/2.25.0/docker_init.sh b/src/docker_modules/bedtools/2.25.0/docker_init.sh
similarity index 100%
rename from src/docker_modules/BEDtools/2.25.0/docker_init.sh
rename to src/docker_modules/bedtools/2.25.0/docker_init.sh
diff --git a/src/docker_modules/Bowtie/1.2.2/Dockerfile b/src/docker_modules/bowtie/1.2.2/Dockerfile
similarity index 100%
rename from src/docker_modules/Bowtie/1.2.2/Dockerfile
rename to src/docker_modules/bowtie/1.2.2/Dockerfile
diff --git a/src/docker_modules/Bowtie/1.2.2/docker_init.sh b/src/docker_modules/bowtie/1.2.2/docker_init.sh
similarity index 100%
rename from src/docker_modules/Bowtie/1.2.2/docker_init.sh
rename to src/docker_modules/bowtie/1.2.2/docker_init.sh
diff --git a/src/docker_modules/Bowtie2/2.3.4.1/Dockerfile b/src/docker_modules/bowtie2/2.3.4.1/Dockerfile
similarity index 100%
rename from src/docker_modules/Bowtie2/2.3.4.1/Dockerfile
rename to src/docker_modules/bowtie2/2.3.4.1/Dockerfile
diff --git a/src/docker_modules/Bowtie2/2.3.4.1/docker_init.sh b/src/docker_modules/bowtie2/2.3.4.1/docker_init.sh
similarity index 100%
rename from src/docker_modules/Bowtie2/2.3.4.1/docker_init.sh
rename to src/docker_modules/bowtie2/2.3.4.1/docker_init.sh
diff --git a/src/docker_modules/BWA/0.7.17/Dockerfile b/src/docker_modules/bwa/0.7.17/Dockerfile
similarity index 100%
rename from src/docker_modules/BWA/0.7.17/Dockerfile
rename to src/docker_modules/bwa/0.7.17/Dockerfile
diff --git a/src/docker_modules/BWA/0.7.17/docker_init.sh b/src/docker_modules/bwa/0.7.17/docker_init.sh
similarity index 100%
rename from src/docker_modules/BWA/0.7.17/docker_init.sh
rename to src/docker_modules/bwa/0.7.17/docker_init.sh
diff --git a/src/docker_modules/deepTools/3.0.2/Dockerfile b/src/docker_modules/deeptools/3.0.2/Dockerfile
similarity index 100%
rename from src/docker_modules/deepTools/3.0.2/Dockerfile
rename to src/docker_modules/deeptools/3.0.2/Dockerfile
diff --git a/src/docker_modules/deepTools/3.0.2/docker_init.sh b/src/docker_modules/deeptools/3.0.2/docker_init.sh
similarity index 100%
rename from src/docker_modules/deepTools/3.0.2/docker_init.sh
rename to src/docker_modules/deeptools/3.0.2/docker_init.sh
diff --git a/src/docker_modules/deepTools/3.1.1/Dockerfile b/src/docker_modules/deeptools/3.1.1/Dockerfile
similarity index 100%
rename from src/docker_modules/deepTools/3.1.1/Dockerfile
rename to src/docker_modules/deeptools/3.1.1/Dockerfile
diff --git a/src/docker_modules/deepTools/3.1.1/docker_init.sh b/src/docker_modules/deeptools/3.1.1/docker_init.sh
similarity index 100%
rename from src/docker_modules/deepTools/3.1.1/docker_init.sh
rename to src/docker_modules/deeptools/3.1.1/docker_init.sh
diff --git a/src/docker_modules/FastQC/0.11.5/Dockerfile b/src/docker_modules/fastqc/0.11.5/Dockerfile
similarity index 100%
rename from src/docker_modules/FastQC/0.11.5/Dockerfile
rename to src/docker_modules/fastqc/0.11.5/Dockerfile
diff --git a/src/docker_modules/FastQC/0.11.5/docker_init.sh b/src/docker_modules/fastqc/0.11.5/docker_init.sh
similarity index 100%
rename from src/docker_modules/FastQC/0.11.5/docker_init.sh
rename to src/docker_modules/fastqc/0.11.5/docker_init.sh
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