From 2411ee582dcbf0b5b5263fa77517af8c727f1e13 Mon Sep 17 00:00:00 2001
From: Laurent Modolo <laurent.modolo@ens-lyon.fr>
Date: Fri, 25 May 2018 16:16:38 +0200
Subject: [PATCH] add docker files for samtools:1.7
---
src/nf_modules/SAMtools/1.7/Dockerfile | 9 +++++++++
src/nf_modules/SAMtools/1.7/docker_init.sh | 2 ++
2 files changed, 11 insertions(+)
create mode 100644 src/nf_modules/SAMtools/1.7/Dockerfile
create mode 100755 src/nf_modules/SAMtools/1.7/docker_init.sh
diff --git a/src/nf_modules/SAMtools/1.7/Dockerfile b/src/nf_modules/SAMtools/1.7/Dockerfile
new file mode 100644
index 0000000..ce910af
--- /dev/null
+++ b/src/nf_modules/SAMtools/1.7/Dockerfile
@@ -0,0 +1,9 @@
+FROM ubuntu:18.04
+MAINTAINER Laurent Modolo
+
+ENV SAMTOOLS_VERSION=1.7
+ENV PACKAGES samtools=${SAMTOOLS_VERSION}*
+
+RUN apt-get update && \
+ apt-get install -y --no-install-recommends ${PACKAGES} && \
+ apt-get clean
diff --git a/src/nf_modules/SAMtools/1.7/docker_init.sh b/src/nf_modules/SAMtools/1.7/docker_init.sh
new file mode 100755
index 0000000..642b0d4
--- /dev/null
+++ b/src/nf_modules/SAMtools/1.7/docker_init.sh
@@ -0,0 +1,2 @@
+#!/bin/sh
+docker build src/nf_modules/SAMtools/1.7 -t 'samtools:1.7'
--
GitLab