From 12c06ef0637688639fc68ee424dacb452d8232f1 Mon Sep 17 00:00:00 2001 From: jshapiro <julie.shapiro@ens-lyon.fr> Date: Fri, 13 Dec 2019 14:27:31 +0100 Subject: [PATCH] added process to fasta_sampler.nf --- src/fasta_sampler.nf | 12 ++++++++++++ 1 file changed, 12 insertions(+) diff --git a/src/fasta_sampler.nf b/src/fasta_sampler.nf index 17348ca..6fb67de 100644 --- a/src/fasta_sampler.nf +++ b/src/fasta_sampler.nf @@ -1,4 +1,16 @@ Channel .fromPath( "data/tiny_dataset/fasta/*.fasta" ) .set { fasta_file } +process sample_fasta { + input: +file fasta from fasta_file + + output: +file "sample.fasta" into fasta_sample + + script: +""" +head ${fasta} > sample.fasta +""" +} -- GitLab