From bad4c93067228a37cfebce2584c4b1a1d609b5f7 Mon Sep 17 00:00:00 2001
From: Gilquin <laurent.gilquin@ens-lyon.fr>
Date: Mon, 14 Nov 2022 14:59:42 +0100
Subject: [PATCH] removed reticulate conda env import
---
scripts/5hAPF.R | 3 ---
scripts/9396.R | 3 ---
scripts/WP.R | 3 ---
3 files changed, 9 deletions(-)
diff --git a/scripts/5hAPF.R b/scripts/5hAPF.R
index a612da9..7f60021 100644
--- a/scripts/5hAPF.R
+++ b/scripts/5hAPF.R
@@ -35,9 +35,6 @@ import::from("./scripts/statistics.R", "varPCA", .character_only=TRUE)
# set global ggplot2 theme
ggplot2::theme_set(theme_custom())
-# load reticulate env
-reticulate::use_condaenv("seurat", required = TRUE)
-
# path to read raw data
datadir <- "./data"
diff --git a/scripts/9396.R b/scripts/9396.R
index eb3dd2e..120c68b 100644
--- a/scripts/9396.R
+++ b/scripts/9396.R
@@ -35,9 +35,6 @@ import::from("./scripts/statistics.R", "varPCA", .character_only=TRUE)
# set global ggplot2 theme
ggplot2::theme_set(theme_custom())
-# load reticulate env
-reticulate::use_condaenv("seurat", required = TRUE)
-
# path to read raw data
datadir <- "./data"
diff --git a/scripts/WP.R b/scripts/WP.R
index a9bdaf6..40fb222 100644
--- a/scripts/WP.R
+++ b/scripts/WP.R
@@ -35,9 +35,6 @@ import::from("./scripts/statistics.R", "varPCA", .character_only=TRUE)
# set global ggplot2 theme
ggplot2::theme_set(theme_custom())
-# load reticulate env
-reticulate::use_condaenv("seurat", required = TRUE)
-
# path to read raw data
datadir <- "./data"
--
GitLab