Explore projects

SNP calling pipeline to find homozygote SNPs present in JU2817 strain but not in JU2859

Coevolution analysis: Retrieval of orthologs of ComR and RocC in Legionella, alignment and phylogeny.

This repository is a template containing scripts to help you build your own nextflow pipeline.

Copie du pipeline de Maxime Lepetit, pour y adapter mon workflow

Biosphere environment for UE NGS VM

This repository allow to reproduce the analysis and create figures as in the current publication.

A program and a set of tools for QC and analysis of coding transcripts obtained after parsing of .gff3 and genome .fa files.