Forked from
LBMC / nextflow
877 commits behind the upstream repository.
-
Laurent Modolo authoredLaurent Modolo authored
fastp_single.config 715 B
profiles {
docker {
docker.temp = 'auto'
docker.enabled = true
process {
withName: fastp_fastq {
container = "fastp:0.19.7"
cpus = 1
}
}
}
singularity {
singularity.enabled = true
process {
withName: fastp_fastq {
cpus = 1
container = "file://bin/fastp:0.19.7.sif"
}
}
}
psmn {
process{
withName: fastp_fastq {
beforeScript = "source /usr/share/lmod/lmod/init/bash; module use ~/privatemodules"
module = "fastp/0.19.7"
executor = "sge"
clusterOptions = "-cwd -V"
cpus = 1
memory = "20GB"
time = "12h"
queue = 'monointeldeb128'
}
}
}
}