Verified Commit 84b2ae0e authored by Laurent Modolo's avatar Laurent Modolo
Browse files

multiqc: add workflow to perform report channel cleanning

parent 2150d981
......@@ -3,6 +3,25 @@ container_url = "lbmc/multiqc:${version}"
params.multiqc = ""
params.multiqc_out = "QC/"
workflow multiqc {
take:
report
main:
report.map{
if (it instanceof List){
it[1]
} else {
it
}
}
.unique()
.set { report_cleaned }
multiqc_default(report_cleaned.collect())
emit:
report = multiqc_default.out.report
}
process multiqc {
container = "${container_url}"
label "big_mem_mono_cpus"
......
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