From 8e2778416bf93ae74a9e737e3206d4c77129fcbb Mon Sep 17 00:00:00 2001
From: hpolvech <helene.polveche@ens-lyon.fr>
Date: Thu, 14 Oct 2021 10:02:56 +0200
Subject: [PATCH] solution 2c
---
session_4/session_4.Rmd | 17 ++++++++++++++++-
1 file changed, 16 insertions(+), 1 deletion(-)
diff --git a/session_4/session_4.Rmd b/session_4/session_4.Rmd
index 173f3f3..fb366bc 100644
--- a/session_4/session_4.Rmd
+++ b/session_4/session_4.Rmd
@@ -531,7 +531,22 @@ ggplot(expr_DM1, aes(samples, Genes, fill= log1p(counts))) +
</p>
</details>
+It s better, but still not perfect!
+Now let s use the [viridis color gradient](https://gotellilab.github.io/GotelliLabMeetingHacks/NickGotelli/ViridisColorPalette.html) for this graph.
-
+<details><summary>Solution</summary>
+ <p>
+```{r heatmapViridis}
+ggplot(expr_DM1, aes(samples, Genes, fill= log1p(counts))) +
+ geom_tile() +
+ scale_fill_viridis_c() +
+ labs(y="Genes", x = "Samples") +
+ theme(
+ axis.text.y = element_text(size= 4),
+ axis.text.x = element_text(size = 4, angle = 90)
+ )
+```
+ </p>
+</details>
--
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