Commits · d3a661dbba5fe2cdfafc1414647433c2f2ecfc97 · alapendr / nextflow

06 Jun, 2018 34 commits
- RNAseq.nf : update · d3a661db
  alapendr authored Jun 06, 2018
  
  d3a661db
- RNAseq.nf : update · 41f64d4b
  alapendr authored Jun 06, 2018
  
  41f64d4b
- RNA_seq.config: update Kallisto · 6b3a4e61
  alapendr authored Jun 06, 2018
  
  6b3a4e61
- RNAseq.nf: update Kallisto · 4d526f57
  alapendr authored Jun 06, 2018
  
  4d526f57
- RNA_seq.config: BEDtools update · 78abef85
  alapendr authored Jun 06, 2018
  
  78abef85
- RNAseq.nf: update BEDtools · 2df9bde9
  alapendr authored Jun 06, 2018
  
  2df9bde9
- RNA_seq.config: update UrQt · ca6fcdc8
  alapendr authored Jun 06, 2018
  
  ca6fcdc8
- RNAseq.nf: update · 07d2b4e3
  alapendr authored Jun 06, 2018
  
  07d2b4e3
- RNAseq.nf: modification · 53383a0b
  alapendr authored Jun 06, 2018
  
  53383a0b
- RNAseq.nf: UrQt · 22ce5134
  alapendr authored Jun 06, 2018
  
  22ce5134
- RNA_seq.config: · 1ed8c0ca
  alapendr authored Jun 06, 2018
  
  1ed8c0ca
- RNA_seq.config: · ef6f5c06
  alapendr authored Jun 06, 2018
  
  ef6f5c06
- RNAseq.nf: · c5082e37
  alapendr authored Jun 06, 2018
  
  c5082e37
- fasta_sampler · bac2773d
  alapendr authored Jun 06, 2018
  
  bac2773d
- fasta_sampler.nf: specifier publishDir · 1efe8725
  alapendr authored Jun 06, 2018
  
  1efe8725
- fasta_sampler.nf: channel definition · b2b6b40d
  alapendr authored Jun 06, 2018
  
  b2b6b40d
- fasta_sampler.nf: add process · b9609248
  alapendr authored Jun 06, 2018
  
  b9609248
- TP.md: add nextflow options · 6289b049
  Laurent Modolo authored Jun 06, 2018
  
  6289b049
- Merge branch 'master' of gitlab_lbmc:pipelines/nextflow · b8f2a45f
  Laurent Modolo authored Jun 06, 2018
  
  b8f2a45f
- add sge config for some modules · 3454e1e8
  Laurent Modolo authored Jun 06, 2018
  
  3454e1e8
- TP.md: fix typo · 1e57a68d
  Laurent Modolo authored Jun 06, 2018
  
  1e57a68d
- TP.md: PSMN section · 98db0358
  Laurent Modolo authored Jun 06, 2018
  
  98db0358
- Kallisto.nf: fix paired end · 0dba9f2b
  Laurent Modolo authored Jun 06, 2018
  
  0dba9f2b
- Kallisto.nf: fix paired name · 1c82c356
  Laurent Modolo authored Jun 06, 2018
  
  1c82c356
- urqt.nf: improve input · a97e28f0
  Laurent Modolo authored Jun 06, 2018
  
  a97e28f0
- trimming: make output channel more clear · 52d58451
  Laurent Modolo authored Jun 06, 2018
  
  52d58451
- TP.md: add info on project visibility · 462e3dd0
  Laurent Modolo authored Jun 06, 2018
  
  462e3dd0
- TP.md: add Kallisto section · efbf5499
  Laurent Modolo authored Jun 06, 2018
  
  efbf5499
- TP.md: add bedtool section · 955c41f2
  Laurent Modolo authored Jun 06, 2018
  
  955c41f2
- BEDtools: add tests files · b6575e65
  Laurent Modolo authored Jun 06, 2018
  
  b6575e65
- UrQt: fix docker container version · 4d440098
  Laurent Modolo authored Jun 06, 2018
  
  4d440098
- mv test.sh file from docker_modules to nf_modules · 8aee48b9
  Laurent Modolo authored Jun 06, 2018
  
  8aee48b9
- doc: add webide.png · d254a0d5
  Laurent Modolo authored Jun 06, 2018
  
  d254a0d5
- TP.md: add cutadapt.config section · 7449f56c
  Laurent Modolo authored Jun 06, 2018
  
  7449f56c
05 Jun, 2018 6 commits
- TP.md: add cutadapt and urqt section · f495e035
  Laurent Modolo authored Jun 05, 2018
  
  f495e035
- TP.md: fasta_sampler section · 8a2d1d85
  Laurent Modolo authored Jun 05, 2018
  
  8a2d1d85
- TP.md: add definition of process and channel · 46372ef3
  Laurent Modolo authored Jun 05, 2018
  
  46372ef3
- TP.md: add correction · 4ef2883d
  Laurent Modolo authored Jun 05, 2018
  
  4ef2883d
- TP.md: add nf_modules section · a0c710af
  Laurent Modolo authored Jun 05, 2018
  
  a0c710af
- TP.md: add sge_module section · 206b5fa6
  Laurent Modolo authored Jun 05, 2018
  
  206b5fa6