Commits · 0dba9f2bf7ac9f01393deab069d081b553323589 · alapendr / nextflow

06 Jun, 2018 12 commits
- Kallisto.nf: fix paired end · 0dba9f2b
  Laurent Modolo authored Jun 06, 2018
  
  0dba9f2b
- Kallisto.nf: fix paired name · 1c82c356
  Laurent Modolo authored Jun 06, 2018
  
  1c82c356
- urqt.nf: improve input · a97e28f0
  Laurent Modolo authored Jun 06, 2018
  
  a97e28f0
- trimming: make output channel more clear · 52d58451
  Laurent Modolo authored Jun 06, 2018
  
  52d58451
- TP.md: add info on project visibility · 462e3dd0
  Laurent Modolo authored Jun 06, 2018
  
  462e3dd0
- TP.md: add Kallisto section · efbf5499
  Laurent Modolo authored Jun 06, 2018
  
  efbf5499
- TP.md: add bedtool section · 955c41f2
  Laurent Modolo authored Jun 06, 2018
  
  955c41f2
- BEDtools: add tests files · b6575e65
  Laurent Modolo authored Jun 06, 2018
  
  b6575e65
- UrQt: fix docker container version · 4d440098
  Laurent Modolo authored Jun 06, 2018
  
  4d440098
- mv test.sh file from docker_modules to nf_modules · 8aee48b9
  Laurent Modolo authored Jun 06, 2018
  
  8aee48b9
- doc: add webide.png · d254a0d5
  Laurent Modolo authored Jun 06, 2018
  
  d254a0d5
- TP.md: add cutadapt.config section · 7449f56c
  Laurent Modolo authored Jun 06, 2018
  
  7449f56c
05 Jun, 2018 27 commits
- TP.md: add cutadapt and urqt section · f495e035
  Laurent Modolo authored Jun 05, 2018
  
  f495e035
- TP.md: fasta_sampler section · 8a2d1d85
  Laurent Modolo authored Jun 05, 2018
  
  8a2d1d85
- TP.md: add definition of process and channel · 46372ef3
  Laurent Modolo authored Jun 05, 2018
  
  46372ef3
- TP.md: add correction · 4ef2883d
  Laurent Modolo authored Jun 05, 2018
  
  4ef2883d
- TP.md: add nf_modules section · a0c710af
  Laurent Modolo authored Jun 05, 2018
  
  a0c710af
- TP.md: add sge_module section · 206b5fa6
  Laurent Modolo authored Jun 05, 2018
  
  206b5fa6
- TP.md: write docker_modules section · 4bd58c06
  Laurent Modolo authored Jun 05, 2018
  
  4bd58c06
- README.md : fix docker path · e4c2f33f
  Laurent Modolo authored Jun 05, 2018
  
  e4c2f33f
- docker_modules: fix path · 1c45e57b
  Laurent Modolo authored Jun 05, 2018
  
  1c45e57b
- mv nf files to nf_modules · 705226a9
  Laurent Modolo authored Jun 05, 2018
  
  705226a9
- correctly mv nf_modules · 4fa9a1b1
  Laurent Modolo authored Jun 05, 2018
  
  4fa9a1b1
- mv nf_modules to docker_modules · f51bf1e4
  Laurent Modolo authored Jun 05, 2018
  
  f51bf1e4
- TP_experimental_biologists.md: add project organisation section · 6630bba3
  Laurent Modolo authored Jun 05, 2018
  
  6630bba3
- doc : add img folder for the TP · d5897bfa
  Laurent Modolo authored Jun 05, 2018
  
  d5897bfa
- TP_experimental_biologists.md: add images · 0633f516
  Laurent Modolo authored Jun 05, 2018
  
  0633f516
- rm src/nf_test.config · a0fea3c5
  Laurent Modolo authored Jun 05, 2018
  
  a0fea3c5
- doc/ ignore .pdf files · a23dc446
  Laurent Modolo authored Jun 05, 2018
  
  a23dc446
- TP_experimental_biologists.md: add cmd for pdf · 8f2097a6
  Laurent Modolo authored Jun 05, 2018
  
  8f2097a6
- Makefile: build TP.pdf · a583b718
  Laurent Modolo authored Jun 05, 2018
  
  a583b718
- Merge branch 'master' into 'master' · ddc4ddae
  Laurent Modolo authored Jun 05, 2018
```
add TP_experimental_biologists.md file

See merge request pipelines/nextflow!1
```
  ddc4ddae
- add TP_experimental_biologists.md file · d1932982
  Laurent Modolo authored Jun 05, 2018
  
  d1932982
- README.md: add tests section · 8f9a3e6d
  Laurent Modolo authored Jun 05, 2018
  
  8f9a3e6d
- make tests.sh files executable · aac63da9
  Laurent Modolo authored Jun 05, 2018
  
  aac63da9
- RSEM: fix dockerfile and add nf and test files · 4d8776b9
  Laurent Modolo authored Jun 05, 2018
  
  4d8776b9
- change collect to toList in nf files and run tests with multiple fastq · f7f61d07
  Laurent Modolo authored Jun 05, 2018
  
  f7f61d07
- Kallisto: nf fix index for single-end · 5f4bd25b
  Laurent Modolo authored Jun 05, 2018
  
  5f4bd25b
- Kallisto: config fix module name · 91613eea
  Laurent Modolo authored Jun 05, 2018
  
  91613eea
04 Jun, 2018 1 commit
- Kallisto: add nf and tests files · f0d5b150
  Laurent Modolo authored Jun 04, 2018
  
  f0d5b150