Package: HTRfit
Title: High-Throughput RNA-seq model fit
Version: 2.1
Authors@R: c(
    person("Arnaud", "Duvermy", , "arnaud.duvermy@ens-lyon.fr", role = c("aut", "cph"),
           comment = c(ORCID = "0009-0002-8509-5506")),
    person("Laurent", "Modolo", , "laurent.modolo@ens-lyon.fr", role = "ctb",
           comment = c(ORCID = "0009-0002-8509-5506")),
    person("Gael", "Yvert", , "gael.yvert@ens-lyon.fr", role = "ctb",
           comment = c(ORCID = "0000-0003-1955-4786")),
    person("Fabien", "Duveau", , "fabien.duveau@ens-lyon.fr", role = c("ctb", "cre"),
           comment = c(ORCID = "0000-0003-4784-0640"))
  )
Description: A statistical framework that allows you to conduct
    differential analysis of gene expression with fixed, mixed, and
    interaction effects. Additionally, HTRfit provides a simulation
    workflow enabling optimization of RNAseq design and analysis.
License: GPL (>= 3)
URL: 
    https://gitbio.ens-lyon.fr/LBMC/yvertlab/vortex/plasticity_mutation/HTRfit
BugReports: 
    https://gitbio.ens-lyon.fr/LBMC/yvertlab/vortex/plasticity_mutation/HTRfit/-/issues
Imports: 
    car,
    data.table,
    ggplot2,
    glmmTMB,
    magrittr,
    MASS,
    parallel,
    reshape2,
    rlang,
    S4Vectors,
    stats,
    utils
Suggests: 
    DESeq2,
    kableExtra,
    knitr,
    rmarkdown,
    testthat
VignetteBuilder: 
    knitr
Config/fusen/version: 0.5.2
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.3.1