Package: HTRfit
Title: HTRfit
Version: 2.0.0
Authors@R: c(
    person("Arnaud", "Duvermy", , "arnaud.duvermy@ens-lyon.fr", role = c("aut", "cre"),
           comment = c(ORCID = "0009-0002-8509-5506")),    
    person("Gael", "Yvert", , "gael.yvert@ens-lyon.fr" , role = "aut")
    person("Fabien", "Duveau", , "fabien.duveau@ens-lyon.fr", role = "aut"),
  )
Description:  A statistical framework that allows you to conduct differential analysis of gene expression with fixed, mixed, and interaction effects. Additionally, HTRfit provides a simulation workflow enabling optimization of RNAseq design and analysis
License: MIT + file LICENSE
URL: https://gitbio.ens-lyon.fr/LBMC/yvertlab/vortex/plasticity_mutation/HTRfit
BugReports: https://gitbio.ens-lyon.fr/LBMC/yvertlab/vortex/plasticity_mutation/HTRfit/-/issues
Imports: 
    car,
    data.table,
    ggplot2,
    glmmTMB,
    gridExtra,
    magrittr,
    MASS,
    parallel,
    reshape2,
    rlang,
    S4Vectors,
    stats,
    utils
Suggests: 
    DESeq2,
    knitr,
    rmarkdown,
    testthat
VignetteBuilder: 
    knitr
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
RoxygenNote: 7.2.2