From efabc091c186a930fa84d74045d811b59d9781d3 Mon Sep 17 00:00:00 2001
From: aduvermy <arnaud.duvermy@ens-lyon.fr>
Date: Mon, 29 Jan 2024 07:34:27 +0100
Subject: [PATCH] retry
---
vignettes/rnaseq_notOnly.Rmd | 5 ++++-
1 file changed, 4 insertions(+), 1 deletion(-)
diff --git a/vignettes/rnaseq_notOnly.Rmd b/vignettes/rnaseq_notOnly.Rmd
index 8d01b76..e750ff6 100644
--- a/vignettes/rnaseq_notOnly.Rmd
+++ b/vignettes/rnaseq_notOnly.Rmd
@@ -37,7 +37,7 @@ data("iris")
plot(density(unlist(iris$Sepal.Width)))
```
-Given this observation, we opt to fit a model for each species using a Gaussian family model (default). Details about model family [here](https://www.rdocumentation.org/packages/stats/versions/3.6.2/topics/family).
+Given this observation, we opt to fit a model for each species using a Gaussian family model (default). Details about model family [here](https://search.r-project.org/CRAN/refmans/glmmTMB/html/nbinom2.html).
```{r example-fitModelParallel_nonRNA, warning = FALSE, message = FALSE}
@@ -45,7 +45,10 @@ l_tmb_iris <- fitModelParallel(
formula = Sepal.Width ~ Sepal.Length ,
data = iris,
group_by = "Species",
+ family = stats::gaussian(),
n.cores = 1)
+```
+```{r example-print }
tidy_results(l_tmb_iris)
```
--
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