From 8f13449fee24eaf5c2ef65ee37f49965ceb70289 Mon Sep 17 00:00:00 2001 From: aduvermy <arnaud.duvermy@ens-lyon.fr> Date: Wed, 21 Sep 2022 09:42:02 +0200 Subject: [PATCH] mv old version to src/v1 folder --- src/{ => v1}/htrsim/DESCRIPTION | 0 src/{ => v1}/htrsim/NAMESPACE | 0 src/{ => v1}/htrsim/R/generate_counts.R | 0 src/{ => v1}/htrsim/R/htrsim_workflow.R | 0 src/{ => v1}/htrsim/R/input_estimation.R | 0 src/{ => v1}/htrsim/R/launch_deseq.R | 0 src/{ => v1}/htrsim/R/setup_cntsGenerator.R | 0 src/{ => v1}/htrsim/devtools_history.R | 0 src/{ => v1}/htrsim/man/estim.alpha.Rd | 0 src/{ => v1}/htrsim/man/estim.mu.Rd | 0 src/{ => v1}/htrsim/man/generate_counts.Rd | 0 src/{ => v1}/htrsim/man/handle_except.Rd | 0 src/{ => v1}/htrsim/man/htrsim.Rd | 0 src/{ => v1}/htrsim/man/reshape_input2setup.Rd | 0 src/{ => v1}/htrsim/man/rn_sim.Rd | 0 src/{ => v1}/htrsim/man/run.deseq.Rd | 0 src/{ => v1}/htrsim/man/setup_countGener.Rd | 0 src/{ => v1}/htrsim/tests/testthat.R | 0 src/{ => v1}/htrsim/tests/testthat/test-name.R | 0 src/{ => v1}/htrsim/vignettes/comment-utiliser-mon-package.Rmd | 0 20 files changed, 0 insertions(+), 0 deletions(-) rename src/{ => v1}/htrsim/DESCRIPTION (100%) rename src/{ => v1}/htrsim/NAMESPACE (100%) rename src/{ => v1}/htrsim/R/generate_counts.R (100%) rename src/{ => v1}/htrsim/R/htrsim_workflow.R (100%) rename src/{ => v1}/htrsim/R/input_estimation.R (100%) rename src/{ => v1}/htrsim/R/launch_deseq.R (100%) rename src/{ => v1}/htrsim/R/setup_cntsGenerator.R (100%) rename src/{ => v1}/htrsim/devtools_history.R (100%) rename src/{ => v1}/htrsim/man/estim.alpha.Rd (100%) rename src/{ => v1}/htrsim/man/estim.mu.Rd (100%) rename src/{ => v1}/htrsim/man/generate_counts.Rd (100%) rename src/{ => v1}/htrsim/man/handle_except.Rd (100%) rename src/{ => v1}/htrsim/man/htrsim.Rd (100%) rename src/{ => v1}/htrsim/man/reshape_input2setup.Rd (100%) rename src/{ => v1}/htrsim/man/rn_sim.Rd (100%) rename src/{ => v1}/htrsim/man/run.deseq.Rd (100%) rename src/{ => v1}/htrsim/man/setup_countGener.Rd (100%) rename src/{ => v1}/htrsim/tests/testthat.R (100%) rename src/{ => v1}/htrsim/tests/testthat/test-name.R (100%) rename src/{ => v1}/htrsim/vignettes/comment-utiliser-mon-package.Rmd (100%) diff --git a/src/htrsim/DESCRIPTION b/src/v1/htrsim/DESCRIPTION similarity index 100% rename from src/htrsim/DESCRIPTION rename to src/v1/htrsim/DESCRIPTION diff --git a/src/htrsim/NAMESPACE b/src/v1/htrsim/NAMESPACE similarity index 100% rename from src/htrsim/NAMESPACE rename to src/v1/htrsim/NAMESPACE diff --git a/src/htrsim/R/generate_counts.R b/src/v1/htrsim/R/generate_counts.R similarity index 100% rename from src/htrsim/R/generate_counts.R rename to src/v1/htrsim/R/generate_counts.R diff --git a/src/htrsim/R/htrsim_workflow.R b/src/v1/htrsim/R/htrsim_workflow.R similarity index 100% rename from src/htrsim/R/htrsim_workflow.R rename to src/v1/htrsim/R/htrsim_workflow.R diff --git a/src/htrsim/R/input_estimation.R b/src/v1/htrsim/R/input_estimation.R similarity index 100% rename from src/htrsim/R/input_estimation.R rename to src/v1/htrsim/R/input_estimation.R diff --git a/src/htrsim/R/launch_deseq.R b/src/v1/htrsim/R/launch_deseq.R similarity index 100% rename from src/htrsim/R/launch_deseq.R rename to src/v1/htrsim/R/launch_deseq.R diff --git a/src/htrsim/R/setup_cntsGenerator.R b/src/v1/htrsim/R/setup_cntsGenerator.R similarity index 100% rename from src/htrsim/R/setup_cntsGenerator.R rename to src/v1/htrsim/R/setup_cntsGenerator.R diff --git a/src/htrsim/devtools_history.R b/src/v1/htrsim/devtools_history.R similarity index 100% rename from src/htrsim/devtools_history.R rename to src/v1/htrsim/devtools_history.R diff --git a/src/htrsim/man/estim.alpha.Rd b/src/v1/htrsim/man/estim.alpha.Rd similarity index 100% rename from src/htrsim/man/estim.alpha.Rd rename to src/v1/htrsim/man/estim.alpha.Rd diff --git a/src/htrsim/man/estim.mu.Rd b/src/v1/htrsim/man/estim.mu.Rd similarity index 100% rename from src/htrsim/man/estim.mu.Rd rename to src/v1/htrsim/man/estim.mu.Rd diff --git a/src/htrsim/man/generate_counts.Rd b/src/v1/htrsim/man/generate_counts.Rd similarity index 100% rename from src/htrsim/man/generate_counts.Rd rename to src/v1/htrsim/man/generate_counts.Rd diff --git a/src/htrsim/man/handle_except.Rd b/src/v1/htrsim/man/handle_except.Rd similarity index 100% rename from src/htrsim/man/handle_except.Rd rename to src/v1/htrsim/man/handle_except.Rd diff --git a/src/htrsim/man/htrsim.Rd b/src/v1/htrsim/man/htrsim.Rd similarity index 100% rename from src/htrsim/man/htrsim.Rd rename to src/v1/htrsim/man/htrsim.Rd diff --git a/src/htrsim/man/reshape_input2setup.Rd b/src/v1/htrsim/man/reshape_input2setup.Rd similarity index 100% rename from src/htrsim/man/reshape_input2setup.Rd rename to src/v1/htrsim/man/reshape_input2setup.Rd diff --git a/src/htrsim/man/rn_sim.Rd b/src/v1/htrsim/man/rn_sim.Rd similarity index 100% rename from src/htrsim/man/rn_sim.Rd rename to src/v1/htrsim/man/rn_sim.Rd diff --git a/src/htrsim/man/run.deseq.Rd b/src/v1/htrsim/man/run.deseq.Rd similarity index 100% rename from src/htrsim/man/run.deseq.Rd rename to src/v1/htrsim/man/run.deseq.Rd diff --git a/src/htrsim/man/setup_countGener.Rd b/src/v1/htrsim/man/setup_countGener.Rd similarity index 100% rename from src/htrsim/man/setup_countGener.Rd rename to src/v1/htrsim/man/setup_countGener.Rd diff --git a/src/htrsim/tests/testthat.R b/src/v1/htrsim/tests/testthat.R similarity index 100% rename from src/htrsim/tests/testthat.R rename to src/v1/htrsim/tests/testthat.R diff --git a/src/htrsim/tests/testthat/test-name.R b/src/v1/htrsim/tests/testthat/test-name.R similarity index 100% rename from src/htrsim/tests/testthat/test-name.R rename to src/v1/htrsim/tests/testthat/test-name.R diff --git a/src/htrsim/vignettes/comment-utiliser-mon-package.Rmd b/src/v1/htrsim/vignettes/comment-utiliser-mon-package.Rmd similarity index 100% rename from src/htrsim/vignettes/comment-utiliser-mon-package.Rmd rename to src/v1/htrsim/vignettes/comment-utiliser-mon-package.Rmd -- GitLab