From 7648bcd93fc4ce569ce7d16ee976aa76a82646cd Mon Sep 17 00:00:00 2001
From: aduvermy <arnaud.duvermy@ens-lyon.fr>
Date: Tue, 24 Oct 2023 16:39:01 +0200
Subject: [PATCH] add dockerfile v1.0.0
---
.dockerfile/v1.0.0/dockerfile | 11 +++++++++++
1 file changed, 11 insertions(+)
create mode 100644 .dockerfile/v1.0.0/dockerfile
diff --git a/.dockerfile/v1.0.0/dockerfile b/.dockerfile/v1.0.0/dockerfile
new file mode 100644
index 0000000..70a8df8
--- /dev/null
+++ b/.dockerfile/v1.0.0/dockerfile
@@ -0,0 +1,11 @@
+FROM r-base:4.3.1
+
+
+RUN apt-get -y update && \
+ apt-get -y install cmake libxml2-dev
+
+RUN wget http://gitbio.ens-lyon.fr/aduvermy/HTRfit/-/archive/v1.0.0/HTRfit-v1.0.0.tar && \
+ tar -xf /HTRfit-v1.0.0.tar && \
+ R -e "install.packages(c('car', 'parallel', 'data.table', 'ggplot2', 'gridExtra', 'glmmTMB', 'magrittr', 'MASS', 'plotROC', 'reshape2', 'rlang', 'stats', 'utils', 'BiocManager'))" && \
+ R -e "BiocManager::install('S4Vectors', update = FALSE)" && \
+ R -e "install.packages('/HTRfit-v1.0.0', repos = NULL, type='source')"
--
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