From 3166c4503ebb3ebd580dacec62309301086a72a2 Mon Sep 17 00:00:00 2001
From: aduvermy <arnaud.duvermy@ens-lyon.fr>
Date: Mon, 25 Mar 2024 08:44:47 +0100
Subject: [PATCH] add dockerfile v2.0.6
Former-commit-id: fee458ba313c594ccaf0a1f83d8988fc9bf395eb
Former-commit-id: b16f7d63084dbf923ca52954c6546183d7496439
Former-commit-id: b903741c1b3ab653b91e046c1e08977f2d996360
---
.../v2.0.6/HTRfit_2.0.6.tar.gz.REMOVED.git-id | 1 +
.dockerfile/v2.0.6/dockerfile | 14 ++++++++++++++
2 files changed, 15 insertions(+)
create mode 100644 .dockerfile/v2.0.6/HTRfit_2.0.6.tar.gz.REMOVED.git-id
create mode 100644 .dockerfile/v2.0.6/dockerfile
diff --git a/.dockerfile/v2.0.6/HTRfit_2.0.6.tar.gz.REMOVED.git-id b/.dockerfile/v2.0.6/HTRfit_2.0.6.tar.gz.REMOVED.git-id
new file mode 100644
index 0000000..ea2ce6b
--- /dev/null
+++ b/.dockerfile/v2.0.6/HTRfit_2.0.6.tar.gz.REMOVED.git-id
@@ -0,0 +1 @@
+539839f9507e37657c032662e06a7f20ba2814e3
\ No newline at end of file
diff --git a/.dockerfile/v2.0.6/dockerfile b/.dockerfile/v2.0.6/dockerfile
new file mode 100644
index 0000000..075d7d8
--- /dev/null
+++ b/.dockerfile/v2.0.6/dockerfile
@@ -0,0 +1,14 @@
+FROM rocker/r-base:4.3.1
+
+RUN apt-get -y update && \
+ apt-get -y install cmake libxml2-dev libcurl4-gnutls-dev
+
+COPY HTRfit_2.0.6.tar.gz /HTRfit_2.0.6.tar.gz
+
+RUN R -e "install.packages(c('parallel', 'data.table', 'ggplot2', 'gridExtra', 'glmmTMB', 'magrittr', 'MASS', 'reshape2', 'rlang', 'stats', 'utils', 'BiocManager', 'car'))"
+
+RUN R -e "BiocManager::install('S4Vectors', update = FALSE)"
+
+RUN R -e "BiocManager::install('DESeq2', update = FALSE)"
+
+RUN R -e "install.packages('/HTRfit_2.0.6.tar.gz', repos = NULL, type='source')"
--
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