diff --git a/src/visualization_fun.R b/src/visualization_fun.R new file mode 100644 index 0000000000000000000000000000000000000000..fe111357b1a6d97984fc906c7198760f61521ebe --- /dev/null +++ b/src/visualization_fun.R @@ -0,0 +1,18 @@ +library(ggplot2) + +# visualization functions +mu_effect_visualization <- function(mu_effect_res){ + label_wrap <- c("mu observed", "N gene DE", "min(|logFC|)", "var observed") + names(label_wrap) <- c("mu_observ", "res_DEA", "statistical_power", "var_observ") + figure = mu_effect_res %>% ggplot(., aes(x=vec_of_mu, y = value, col=factor(N_rep))) + + geom_point() + facet_wrap(~variable, scales = "free_y", labeller = labeller(variable = label_wrap)) + labs(color = "N replicates") + return(figure) +} + +size_effect_visualization <- function(alpha_effect_res){ + label_wrap <- c("mu observed", "N gene DE", "min(|logFC|)", "var observed") + names(label_wrap) <- c("mu_observ", "res_DEA", "statistical_power", "var_observ") + figure = alpha_effect_res %>% ggplot(., aes(x=vec_of_alpha, y = value, col=factor(N_rep))) + + geom_point() + facet_wrap(~variable, scales = "free_y", labeller = labeller(variable = label_wrap)) + labs(color = "N replicates") + return(figure) +} \ No newline at end of file